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| -rw-r--r-- | img/data-lineage-2.pdf (renamed from img/make-demo-2.pdf) | bin | 6481 -> 6558 bytes | |||
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| -rw-r--r-- | img/data-lineage-4.pdf (renamed from img/make-demo-5.pdf) | bin | 7553 -> 7627 bytes | |||
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| -rw-r--r-- | reproducible-paper.tex | 46 |
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b/reproducible-paper.tex index 53d293b..7a6cbef 100644 --- a/reproducible-paper.tex +++ b/reproducible-paper.tex @@ -1008,49 +1008,49 @@ \vspace{1cm} \hfill Let's see how the analysis is managed in a hypothetical project... \end{frame} - \makedemoslide{img/make-demo-1.pdf} + \makedemoslide{img/data-lineage-1.pdf} {Makefiles (\texttt{\*.mk}) keep contextually separate parts of the project, all imported into \texttt{top-make.mk}} - \makedemoslide{img/make-demo-2.pdf} + \makedemoslide{img/data-lineage-2.pdf} {The ultimate purpose of the project is to produce a paper/report (in PDF).} - \makedemoslide{img/make-demo-3.pdf} - {The narrative description of the PDF and \LaTeX{} typography is kept in \texttt{paper.tex}.} - \makedemoslide{img/make-demo-4.pdf} + \makedemoslide{img/data-lineage-3.pdf} + {The narrative description, typography and references are in \texttt{paper.tex} \& \texttt{references.tex}.} + \makedemoslide{img/data-lineage-4.pdf} {Analysis outputs (blended into the PDF as \LaTeX{} macros) come from \texttt{project.tex}.} - \makedemoslide{img/make-demo-5.pdf} + \makedemoslide{img/data-lineage-5.pdf} {But analysis outputs must first be \emph{verified} (with checksums) before entering the report/paper.} - \makedemoslide{img/make-demo-6.pdf} + \makedemoslide{img/data-lineage-6.pdf} {Basic project info comes from \texttt{initialize.tex}.} - \makedemoslide{img/make-demo-7.pdf} + \makedemoslide{img/data-lineage-7.pdf} {Reported values about the downloaded inputs come from \texttt{download.tex}.} - \makedemoslide{img/make-demo-8.pdf} + \makedemoslide{img/data-lineage-8.pdf} {... for example the number of rows in the second input (a catalog) of the project.} - \makedemoslide{img/make-demo-9.pdf} + \makedemoslide{img/data-lineage-9.pdf} {The URL to download \texttt{input2.dat}, and a checksum to validate it, are stored in \texttt{INPUTS.conf}.} - \makedemoslide{img/make-demo-10.pdf} + \makedemoslide{img/data-lineage-10.pdf} {Reported values from first analysis steps stored in \texttt{analysis1.tex}.} - \makedemoslide{img/make-demo-11.pdf} + \makedemoslide{img/data-lineage-11.pdf} {... for example the average of the numbers in \texttt{out-1b.dat}.} - \makedemoslide{img/make-demo-12.pdf} + \makedemoslide{img/data-lineage-12.pdf} {But \texttt{out-1b.dat} itself depends on other files and a paramter (for example a multiple of sigma).} - \makedemoslide{img/make-demo-13.pdf} + \makedemoslide{img/data-lineage-13.pdf} {\texttt{out-1a.dat} is built from a downloaded dataset.} - \makedemoslide{img/make-demo-14.pdf} + \makedemoslide{img/data-lineage-14.pdf} {Download URL and checksum of \texttt{input1.dat} also stored in \texttt{INPUTS.conf}.} - \makedemoslide{img/make-demo-15.pdf} + \makedemoslide{img/data-lineage-15.pdf} {Reported values from second analysis steps stored in \texttt{analysis2.tex}.} - \makedemoslide{img/make-demo-16.pdf} + \makedemoslide{img/data-lineage-16.pdf} {... for example the number of selected rows in \texttt{out-2b.dat}.} - \makedemoslide{img/make-demo-17.pdf} + \makedemoslide{img/data-lineage-17.pdf} {\texttt{out-2b.dat} is derived from \texttt{out-1b.dat} (for example, rejected some of \texttt{out-1b.dat}'s rows).} - \makedemoslide{img/make-demo-18.pdf} + \makedemoslide{img/data-lineage-18.pdf} {Reported values from third analysis steps stored in \texttt{analysis3.tex}.} - \makedemoslide{img/make-demo-19.pdf} + \makedemoslide{img/data-lineage-19.pdf} {... for example measurements from both \texttt{out-3a.dat} and \texttt{out-3b.dat}.} - \makedemoslide{img/make-demo-20.pdf} + \makedemoslide{img/data-lineage-20.pdf} {\texttt{out-3b.dat} is generated from an analysis on \texttt{out-2a.dat}.} - \makedemoslide{img/make-demo-21.pdf} + \makedemoslide{img/data-lineage-21.pdf} {But \texttt{out-2a.dat} itself is generated from \texttt{input1.dat} and an analysis which has two settings.} - \makedemoslide{img/make-demo-22.pdf} + \makedemoslide{img/data-lineage-22.pdf} {\texttt{out-3a.dat} also depends on \texttt{out-1a.dat} and an analysis with needs one parameter.} |