diff options
Diffstat (limited to 'reproduce')
| -rw-r--r-- | reproduce/config/pipeline/dependency-versions.mk | 18 | ||||
| -rw-r--r-- | reproduce/src/make/initialize.mk | 97 | ||||
| -rw-r--r-- | reproduce/src/make/paper.mk | 3 |
3 files changed, 12 insertions, 106 deletions
diff --git a/reproduce/config/pipeline/dependency-versions.mk b/reproduce/config/pipeline/dependency-versions.mk index 2e74a45..2af633f 100644 --- a/reproduce/config/pipeline/dependency-versions.mk +++ b/reproduce/config/pipeline/dependency-versions.mk @@ -19,11 +19,14 @@ # A copy of the GNU General Public License is available at # <http://www.gnu.org/licenses/>. -# Programs +# C/C++ programs and libraries. +atlas-version = 3.10.3 bash-version = 5.0 binutils-version = 2.31.1 +cfitsio-version = 3.45 cmake-version = 3.12.4 coreutils-version = 8.30 +curl-version = 7.63.0 diffutils-version = 3.7 fftw-version = 3.3.8 findutils-version = 4.6.0.199-e3fc @@ -36,12 +39,15 @@ git-version = 2.20.1 gmp-version = 6.1.2 gnuastro-version = 0.8 grep-version = 3.3 +gsl-version = 2.5 gzip-version = 1.10 hdf5-version = 1.10.5 isl-version = 0.18 libbsd-version = 0.9.1 libffi-version = 3.2.1 +libjpeg-version = v9b libpng-version = 1.6.36 +libtiff-version = 4.0.10 libtool-version = 2.4.6 lzip-version = 1.20 make-version = 4.2.90 @@ -49,6 +55,7 @@ metastore-version = 1.1.2-23-fa9170b mpfr-version = 4.0.2 mpc-version = 1.1.0 ncurses-version = 6.1 +openblas-version = 0.3.5 openmpi-version = 4.0.1 openssl-version = 1.1.1a patchelf-version = 0.9 @@ -62,15 +69,6 @@ wget-version = 1.20.1 which-version = 2.21 xz-version = 5.2.4 zip-version = 3.0 - -# Libraries -atlas-version = 3.10.3 -cfitsio-version = 3.45 -curl-version = 7.63.0 -gsl-version = 2.5 -libjpeg-version = v9b -libtiff-version = 4.0.10 -openblas-version = 0.3.5 zlib-version = 1.2.11 # Special libraries diff --git a/reproduce/src/make/initialize.mk b/reproduce/src/make/initialize.mk index 66e7c77..3ae580a 100644 --- a/reproduce/src/make/initialize.mk +++ b/reproduce/src/make/initialize.mk @@ -160,8 +160,8 @@ export MPI_PYTHON3_SITEARCH := # option: they add too many extra checks that make it hard to find what you # are looking for in this pipeline. .SUFFIXES: -$(texdir) $(lockdir): | $(BDIR); mkdir $@ -$(mtexdir) $(texbdir): | $(texdir); mkdir $@ +$(lockdir): | $(BDIR); mkdir $@ +$(texbdir): | $(texdir); mkdir $@ $(tikzdir): | $(texbdir); mkdir $@ && ln -s $(tikzdir) tex/tikz @@ -348,96 +348,3 @@ $(mtexdir)/initialize.tex: | $(mtexdir) # Version of the pipeline and build directory (for LaTeX inputs). @v=$$(git describe --dirty --always); echo "\newcommand{\pipelineversion}{$$v}" > $@ - - # Versions of programs (same order as 'dependency-versions.mk'), - # ordered alphabetically (by their executable name). - echo "\newcommand{\\bashversion}{$(bash-version)}" >> $@ -# echo "\newcommand{\\bashversion}{$(binutils-version)}" >> $@ - echo "\newcommand{\\bziptwoversion}{$(bzip2-version)}" >> $@ - echo "\newcommand{\\cmakeversion}{$(cmake-version)}" >> $@ - echo "\newcommand{\\coreutilsversion}{$(coreutils-version)}" >> $@ - echo "\newcommand{\\diffutilsversion}{$(diffutils-version)}" >> $@ - echo "\newcommand{\\findutilsversion}{$(findutils-version)}" >> $@ - echo "\newcommand{\\flockversion}{$(flock-version)}" >> $@ - echo "\newcommand{\\freetypeversion}{$(freetype-version)}" >> $@ - echo "\newcommand{\\gawkversion}{$(gawk-version)}" >> $@ - echo "\newcommand{\\gccversion}{$(gcc-version)}" >> $@ - echo "\newcommand{\\ghostscriptversion}{$(ghostscript-version)}" >> $@ - echo "\newcommand{\\gitversion}{$(git-version)}" >> $@ - echo "\newcommand{\\gmpversion}{$(gmp-version)}" >> $@ - echo "\newcommand{\\gnuastroversion}{$(gnuastro-version)}" >> $@ - echo "\newcommand{\\grepversion}{$(grep-version)}" >> $@ - echo "\newcommand{\\gzipversion}{$(gzip-version)}" >> $@ - echo "\newcommand{\\islversion}{$(isl-version)}" >> $@ - echo "\newcommand{\\lzipversion}{$(lzip-version)}" >> $@ - echo "\newcommand{\\makeversion}{$(make-version)}" >> $@ - echo "\newcommand{\\metastoreversion}{$(metastore-version)}" >> $@ - echo "\newcommand{\\mpfrversion}{$(mpfr-version)}" >> $@ - echo "\newcommand{\\mpcversion}{$(mpc-version)}" >> $@ - echo "\newcommand{\\ncursesversion}{$(ncurses-version)}" >> $@ - echo "\newcommand{\\opensslversion}{$(openssl-version)}" >> $@ - echo "\newcommand{\\patchelfversion}{$(patchelf-version)}" >> $@ - echo "\newcommand{\\pkgconfigversion}{$(pkgconfig-version)}" >> $@ - echo "\newcommand{\\pythonversion}{$(python-version)}" >> $@ - echo "\newcommand{\\readlineversion}{$(readline-version)}" >> $@ - echo "\newcommand{\\sedversion}{$(sed-version)}" >> $@ - echo "\newcommand{\\swarpversion}{$(swarp-version)}" >> $@ - echo "\newcommand{\\tarversion}{$(tar-version)}" >> $@ - echo "\newcommand{\\unzipversion}{$(unzip-version)}" >> $@ - echo "\newcommand{\\wgetversion}{$(wget-version)}" >> $@ - echo "\newcommand{\\whichversion}{$(which-version)}" >> $@ - echo "\newcommand{\\xzversion}{$(xz-version)}" >> $@ - echo "\newcommand{\\zipversion}{$(zip-version)}" >> $@ - - # Libraries. - echo "\newcommand{\\atlasversion}{$(cfitsio-version)}" >> $@ - echo "\newcommand{\\cfitsioversion}{$(cfitsio-version)}" >> $@ - echo "\newcommand{\\curlversion}{$(curl-version)}" >> $@ - echo "\newcommand{\\gslversion}{$(gsl-version)}" >> $@ - echo "\newcommand{\\lapack}{$(lapack-version)}" >> $@ - echo "\newcommand{\\libbsdversion}{$(libbsd-version)}" >> $@ - echo "\newcommand{\\libffiversion}{$(libffi-version)}" >> $@ - echo "\newcommand{\\libgittwoversion}{$(libgit2-version)}" >> $@ - echo "\newcommand{\\libjpegversion}{$(libjpeg-version)}" >> $@ - echo "\newcommand{\\libpngversion}{$(libpng-version)}" >> $@ - echo "\newcommand{\\libtiffversion}{$(libtiff-version)}" >> $@ - echo "\newcommand{\\libtoolversion}{$(libtool-version)}" >> $@ - echo "\newcommand{\\wcslibversion}{$(wcslib-version)}" >> $@ - echo "\newcommand{\\zlibversion}{$(zlib-version)}" >> $@ - - # Python modules. - echo "\newcommand{\\asncryptoversion}{$(asn1crypto-version)}" >> $@ - echo "\newcommand{\\astroqueryversion}{$(astroquery-version)}" >> $@ - echo "\newcommand{\\astropyversion}{$(astropy-version)}" >> $@ - echo "\newcommand{\\beautifulsoupversion}{$(beautifulsoup4-version)}" >> $@ - echo "\newcommand{\\certifiversion}{$(certifi-version)}" >> $@ - echo "\newcommand{\\cffiversion}{$(cffi-version)}" >> $@ - echo "\newcommand{\\chardetversion}{$(chardet-version)}" >> $@ - echo "\newcommand{\\cryptographyversion}{$(cryptography-version)}" >> $@ - echo "\newcommand{\\cyclerversion}{$(cycler-version)}" >> $@ - echo "\newcommand{\\entrypointsversion}{$(entrypoints-version)}" >> $@ - echo "\newcommand{\\hpyversion}{$(h5py-version)}" >> $@ - echo "\newcommand{\\htmlfivelibversion}{$(html5lib-version)}" >> $@ - echo "\newcommand{\\idaversion}{$(idna-version)}" >> $@ - echo "\newcommand{\\jeepneyversion}{$(jeepney-version)}" >> $@ - echo "\newcommand{\\kiwisolverversion}{$(kiwisolver-version)}" >> $@ - echo "\newcommand{\\keyringversion}{$(keyring-version)}" >> $@ - echo "\newcommand{\\matplotlibversion}{$(matplotlib-version)}" >> $@ - echo "\newcommand{\\numpyversion}{$(numpy-version)}" >> $@ -# echo "\newcommand{\\pipversion}{$(pip-version)}" >> $@ - echo "\newcommand{\\pycparserversion}{$(pycparser-version)}" >> $@ - echo "\newcommand{\\pyparsingversion}{$(pyparsing-version)}" >> $@ - echo "\newcommand{\\pythondateutilversion}{$(python-dateutil-version)}" >> $@ - echo "\newcommand{\\requestsversion}{$(requests-version)}" >> $@ - echo "\newcommand{\\scipyversion}{$(scipy-version)}" >> $@ - echo "\newcommand{\\screenstorageversion}{$(secretstorage-version)}" >> $@ - echo "\newcommand{\\setuptoolsversion}{$(setuptools-version)}" >> $@ - echo "\newcommand{\\setuptoolsscmversion}{$(setuptools_scm-version)}" >> $@ - echo "\newcommand{\\sixversion}{$(six-version)}" >> $@ - echo "\newcommand{\\soupsieveversion}{$(soupsieve-version)}" >> $@ - echo "\newcommand{\\urllibthreeversion}{$(urllib3-version)}" >> $@ -# echo "\newcommand{\\virtualenvversion}{$(virtualenv-version)}" >> $@ - echo "\newcommand{\\webencodingsversion}{$(webencodings-version)}" >> $@ - - # TeX package versions - cat $(BDIR)/dependencies/texlive-versions.tex >> $@ diff --git a/reproduce/src/make/paper.mk b/reproduce/src/make/paper.mk index d148c08..af9a70e 100644 --- a/reproduce/src/make/paper.mk +++ b/reproduce/src/make/paper.mk @@ -54,7 +54,8 @@ $(mtexdir)/pipeline.tex: $(foreach s, $(subst paper,,$(makesrc)), $(mtexdir)/$(s if [ ! -e tex/pipeline ]; then ln -s $(texdir) tex/pipeline; fi # Put a LaTeX input command for all the necessary macro files. - rm -f $(mtexdir)/pipeline.tex + echo "\input{tex/pipeline/macros/dependency-versions.tex}" \ + > $(mtexdir)/pipeline.tex for t in $(subst paper,,$(makesrc)); do echo "\input{tex/pipeline/macros/$$t.tex}" >> $(mtexdir)/pipeline.tex done |