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authorMohammad Akhlaghi <mohammad@akhlaghi.org>2019-12-14 04:28:47 +0000
committerMohammad Akhlaghi <mohammad@akhlaghi.org>2019-12-14 04:30:43 +0000
commitac80e3bc163a177c5b33ad2a1b8ab9f6f09becd8 (patch)
tree929457b77d1634b8b3caa9955d454f9550350b3d /reproduce/software/make
parent8d65a9effe9fbd94cb0141e8a5c511ad8d6cda9d (diff)
Core R package is now in template
With this commit, we now have the core R interpretter within the template. We should later include instructions to install R packages (possibly in a separate top-level Makefile like Python).
Diffstat (limited to 'reproduce/software/make')
-rw-r--r--reproduce/software/make/high-level.mk14
1 files changed, 14 insertions, 0 deletions
diff --git a/reproduce/software/make/high-level.mk b/reproduce/software/make/high-level.mk
index 56af4b9..f6c2f76 100644
--- a/reproduce/software/make/high-level.mk
+++ b/reproduce/software/make/high-level.mk
@@ -171,6 +171,7 @@ tarballs = $(foreach t, apachelog4cxx-$(apachelog4cxx-version).tar.lz \
openmpi-$(openmpi-version).tar.gz \
openssh-$(openssh-version).tar.gz \
pixman-$(pixman-version).tar.gz \
+ R-$(R-version).tar.gz \
scamp-$(scamp-version).tar.lz \
scons-$(scons-version).tar.gz \
sextractor-$(sextractor-version).tar.lz \
@@ -267,6 +268,9 @@ $(tarballs): $(tdir)/%: | $(lockdir)
w=https://download.open-mpi.org/release/open-mpi/v$$majorver/$*
elif [ $$n = openssh ]; then c=$(openssh-checksum); w=https://artfiles.org/openbsd/OpenSSH/portable
elif [ $$n = pixman ]; then c=$(pixman-checksum); w=https://www.cairographics.org/releases
+ elif [ $$n = R ]; then c=$(R-checksum);
+ majver=$$(echo $(R-version) | sed -e's/\./ /g' | awk '{print $$1}')
+ w=https://cran.r-project.org/src/base/R-$$majver
elif [ $$n = rpcsvc ]; then c=$(rpcsvc-proto-checksum); w=https://github.com/thkukuk/rpcsvc-proto/releases/download/v$(rpcsvc-proto-version)
elif [ $$n = scamp ]; then c=$(scamp-checksum); w=http://akhlaghi.org/reproduce-software
elif [ $$n = scons ]; then
@@ -1024,6 +1028,16 @@ $(ibidir)/netpbm: $(ibidir)/unzip \
&& rm -rf $$unpackdir \
&& echo "Netpbm $(netpbm-version)" > $@
+# R programming language
+$(ibidir)/R: $(ibidir)/libpng \
+ $(ibidir)/libjpeg \
+ $(ibidir)/libtiff \
+ | $(tdir)/R-$(R-version).tar.gz
+ export R_SHELL=$(SHELL); \
+ $(call gbuild, R-$(R-version), static, \
+ --without-x --with-readline) \
+ && echo "R $(R-version)" > $@
+
# SCAMP documentation says ATLAS is a mandatory prerequisite for using
# SCAMP. We have ATLAS into the project but there are some problems with the
# libraries that are not yet solved. However, we tried to install it with