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| author | Raul Infante-Sainz <infantesainz@gmail.com> | 2019-04-17 14:32:40 +0100 |
|---|---|---|
| committer | Raul Infante-Sainz <infantesainz@gmail.com> | 2019-04-17 14:32:40 +0100 |
| commit | 3c7d59a46ca2940435258cb2bc1050aea5fd0b87 (patch) | |
| tree | 7905c00a74107d93d8f6ec23a36be6093ad2c708 /reproduce/software/make | |
| parent | e9160416416090a67b99f31c2c43f33f8afd6e23 (diff) | |
SExtractor is now included into the project
With this commit, we add SExtractor to be installed into the project. It
is a widely used program to detect object and build catalogues from
astronomical images.
We had some problems when installing it because it could not link with
some ATLAS libraries. But, since we have OpenBLAS installed, we can use
it to override the problem with ATLAS.
Diffstat (limited to 'reproduce/software/make')
| -rw-r--r-- | reproduce/software/make/high-level.mk | 19 |
1 files changed, 18 insertions, 1 deletions
diff --git a/reproduce/software/make/high-level.mk b/reproduce/software/make/high-level.mk index 144057e..59287c6 100644 --- a/reproduce/software/make/high-level.mk +++ b/reproduce/software/make/high-level.mk @@ -51,7 +51,7 @@ ipydir = $(BDIR)/software/installed/version-info/python # successfully on Mac (only static) and GNU/Linux (shared and static). But, # since it takes a few hours to build, it is not currently a target. top-level-libraries = # atlas -top-level-programs = astrometrynet gnuastro metastore swarp +top-level-programs = astrometrynet gnuastro metastore sextractor swarp top-level-python = astroquery matplotlib all: $(foreach p, $(top-level-libraries), $(ilidir)/$(p)) \ $(foreach p, $(top-level-programs), $(ibidir)/$(p)) \ @@ -139,6 +139,7 @@ tarballs = $(foreach t, astrometry.net-$(astrometry-version).tar.gz \ openmpi-$(openmpi-version).tar.gz \ openblas-$(openblas-version).tar.gz \ pixman-$(pixman-version).tar.gz \ + sextractor-$(sextractor-version).tar.lz \ swarp-$(swarp-version).tar.gz \ swig-$(swig-version).tar.gz \ tiff-$(libtiff-version).tar.gz \ @@ -207,6 +208,7 @@ $(tarballs): $(tdir)/%: | $(lockdir) majorver=$$(echo $(openmpi-version) | sed -e 's/\./ /g' | awk '{printf("%d.%d", $$1, $$2)}') w=https://download.open-mpi.org/release/open-mpi/v$$majorver/$* elif [ $$n = pixman ]; then w=https://www.cairographics.org/releases + elif [ $$n = sextractor ]; then w=http://akhlaghi.org/src elif [ $$n = swarp ]; then w=https://www.astromatic.net/download/swarp elif [ $$n = swig ]; then w=https://sourceforge.net/projects/swig/files/swig/swig-$(swig-version) elif [ $$n = tiff ]; then w=https://download.osgeo.org/libtiff @@ -712,6 +714,21 @@ $(ibidir)/netpbm: $(tdir)/netpbm-$(netpbm-version).tgz \ && rm -rf $$unpackdir \ && echo "Netpbm $(netpbm-version)" > $@ +# Sextractor crashes complaining about not linking with some ATLAS +# libraries. But we can override this issue since we have Openblas +# installed, it is just necessary to explicity tell sextractor to use it in +# the configuration step. +$(ibidir)/sextractor: $(tdir)/sextractor-$(sextractor-version).tar.lz \ + $(ilidir)/openblas \ + $(ilidir)/fftw + $(call gbuild, $<, sextractor-$(sextractor-version), static, \ + --enable-threads --enable-openblas \ + --with-openblas-libdir=$(ildir) \ + --with-openblas-incdir=$(idir)/include) \ + && ln -fs $(ibdir)/sex $(ibdir)/sextractor \ + && cp $(dtexdir)/sextractor.tex $(ictdir)/ \ + && echo "Sextractor $(sextractor-version) \citep{sextractor}" > $@ + $(ibidir)/swarp: $(tdir)/swarp-$(swarp-version).tar.gz \ $(ilidir)/fftw $(call gbuild, $<, swarp-$(swarp-version), static, \ |