diff options
| -rw-r--r-- | .file-metadata | bin | 6194 -> 6282 bytes | |||
| -rw-r--r-- | reproduce/software/bibtex/sextractor.tex | 18 | ||||
| -rw-r--r-- | reproduce/software/config/installation/versions.mk | 1 | ||||
| -rw-r--r-- | reproduce/software/make/high-level.mk | 19 |
4 files changed, 37 insertions, 1 deletions
diff --git a/.file-metadata b/.file-metadata Binary files differindex 1c09605..bbda38e 100644 --- a/.file-metadata +++ b/.file-metadata diff --git a/reproduce/software/bibtex/sextractor.tex b/reproduce/software/bibtex/sextractor.tex new file mode 100644 index 0000000..90d3eff --- /dev/null +++ b/reproduce/software/bibtex/sextractor.tex @@ -0,0 +1,18 @@ +%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com> +%% +%% Copying and distribution of this file, with or without modification, +%% are permitted in any medium without royalty provided the copyright +%% notice and this notice are preserved. This file is offered as-is, +%% without any warranty. + +@article{sextractor, + author = {{Bertin, E.} and {Arnouts, S.}}, + title = {SExtractor: Software for source extraction}, + DOI= "10.1051/aas:1996164", + url= "https://doi.org/10.1051/aas:1996164", + journal = {AASS}, + year = 1996, + volume = 117, + number = 2, + pages = "393", +} diff --git a/reproduce/software/config/installation/versions.mk b/reproduce/software/config/installation/versions.mk index 270eb97..b7de983 100644 --- a/reproduce/software/config/installation/versions.mk +++ b/reproduce/software/config/installation/versions.mk @@ -66,6 +66,7 @@ pkgconfig-version = 0.29.2 python-version = 3.7.3 readline-version = 8.0 sed-version = 4.7 +sextractor-version = 2.25.0 swarp-version = 2.38.0 swig-version = 3.0.12 tar-version = 1.32 diff --git a/reproduce/software/make/high-level.mk b/reproduce/software/make/high-level.mk index 144057e..59287c6 100644 --- a/reproduce/software/make/high-level.mk +++ b/reproduce/software/make/high-level.mk @@ -51,7 +51,7 @@ ipydir = $(BDIR)/software/installed/version-info/python # successfully on Mac (only static) and GNU/Linux (shared and static). But, # since it takes a few hours to build, it is not currently a target. top-level-libraries = # atlas -top-level-programs = astrometrynet gnuastro metastore swarp +top-level-programs = astrometrynet gnuastro metastore sextractor swarp top-level-python = astroquery matplotlib all: $(foreach p, $(top-level-libraries), $(ilidir)/$(p)) \ $(foreach p, $(top-level-programs), $(ibidir)/$(p)) \ @@ -139,6 +139,7 @@ tarballs = $(foreach t, astrometry.net-$(astrometry-version).tar.gz \ openmpi-$(openmpi-version).tar.gz \ openblas-$(openblas-version).tar.gz \ pixman-$(pixman-version).tar.gz \ + sextractor-$(sextractor-version).tar.lz \ swarp-$(swarp-version).tar.gz \ swig-$(swig-version).tar.gz \ tiff-$(libtiff-version).tar.gz \ @@ -207,6 +208,7 @@ $(tarballs): $(tdir)/%: | $(lockdir) majorver=$$(echo $(openmpi-version) | sed -e 's/\./ /g' | awk '{printf("%d.%d", $$1, $$2)}') w=https://download.open-mpi.org/release/open-mpi/v$$majorver/$* elif [ $$n = pixman ]; then w=https://www.cairographics.org/releases + elif [ $$n = sextractor ]; then w=http://akhlaghi.org/src elif [ $$n = swarp ]; then w=https://www.astromatic.net/download/swarp elif [ $$n = swig ]; then w=https://sourceforge.net/projects/swig/files/swig/swig-$(swig-version) elif [ $$n = tiff ]; then w=https://download.osgeo.org/libtiff @@ -712,6 +714,21 @@ $(ibidir)/netpbm: $(tdir)/netpbm-$(netpbm-version).tgz \ && rm -rf $$unpackdir \ && echo "Netpbm $(netpbm-version)" > $@ +# Sextractor crashes complaining about not linking with some ATLAS +# libraries. But we can override this issue since we have Openblas +# installed, it is just necessary to explicity tell sextractor to use it in +# the configuration step. +$(ibidir)/sextractor: $(tdir)/sextractor-$(sextractor-version).tar.lz \ + $(ilidir)/openblas \ + $(ilidir)/fftw + $(call gbuild, $<, sextractor-$(sextractor-version), static, \ + --enable-threads --enable-openblas \ + --with-openblas-libdir=$(ildir) \ + --with-openblas-incdir=$(idir)/include) \ + && ln -fs $(ibdir)/sex $(ibdir)/sextractor \ + && cp $(dtexdir)/sextractor.tex $(ictdir)/ \ + && echo "Sextractor $(sextractor-version) \citep{sextractor}" > $@ + $(ibidir)/swarp: $(tdir)/swarp-$(swarp-version).tar.gz \ $(ilidir)/fftw $(call gbuild, $<, swarp-$(swarp-version), static, \ |