diff options
Diffstat (limited to 'reproduce/src/make/initialize.mk')
| -rw-r--r-- | reproduce/src/make/initialize.mk | 92 |
1 files changed, 81 insertions, 11 deletions
diff --git a/reproduce/src/make/initialize.mk b/reproduce/src/make/initialize.mk index 57565b9..b3180e3 100644 --- a/reproduce/src/make/initialize.mk +++ b/reproduce/src/make/initialize.mk @@ -158,10 +158,15 @@ $(mtexdir) $(texbdir): | $(texdir); mkdir $@ # we want to ensure that the file is always built in every run: it contains # the pipeline version which may change between two separate runs, even # when no file actually differs. -.PHONY: all clean distclean clean-mmap $(mtexdir)/initialize.tex +packagebasename := $(shell echo paper-$$(git describe --dirty --always)) +packagecontents = $(texdir)/$(packagebasename) +.PHONY: all clean distclean clean-mmap tarball zip $(packagecontents) \ + $(mtexdir)/initialize.tex + # --------- Delete for no Gnuastro --------- clean-mmap:; rm -f reproduce/config/gnuastro/mmap* # ------------------------------------------ + clean: clean-mmap # Delete the top-level PDF file. rm -f *.pdf @@ -173,6 +178,7 @@ clean: clean-mmap # are using afterwards. shopt -s extglob rm -rf $(BDIR)/!(dependencies) + distclean: clean # We'll be deleting the built environent programs and just need the # `rm' program. So for this recipe, we'll use the host system's @@ -185,13 +191,75 @@ distclean: clean +# Packaging rules +# --------------- +# +# With the rules in this section, you can package the project in a state +# that is ready for building the final PDF with LaTeX. This is useful for +# collaborators who only want to contribute to the text of your project, +# without having to worry about the technicalities of the analysis. +$(packagecontents): | $(texdir) + + # Set up the output directory, delete it if it exists and remake it + # to fill with new contents. + dir=$(texdir)/$(packagebasename) + rm -rf $$dir + mkdir $$dir + + # Copy the top-level contents into it. + cp configure COPYING for-group README.md README-hacking.md $$dir/ + + # Since the tarball is mainly intended for high-level building of + # the PDF with LaTeX, we'll comment the `makepdf' LaTeX macro in + # the paper. + sed -e's|\\newcommand{\\makepdf}{}|%\\newcommand{\\makepdf}{}|' \ + paper.tex > $$dir/paper.tex + + # Copy all the `reproduce' contents except for the `build' symbolic + # link. + shopt -s extglob + mkdir $$dir/reproduce $$dir/tex $$dir/tex/tikz + cp tex/*.tex $$dir/tex + cp -r reproduce/!(build) $$dir/reproduce + cp tex/tikz/*.pdf $$dir/tex/tikz + + # PIPELINE SPECIFIC: add or remove any of the copied files above, + # specific to your pipeline here. + + # Clean all temporary files. + cd $(texdir) + find $(packagebasename) -name \*~ -delete + +# Package into `.tar.gz'. +tarball: $(packagecontents) + curdir=$$(pwd) + cd $(texdir) + tar -cf $(packagebasename).tar $(packagebasename) + gzip -f --best $(packagebasename).tar + cd $$curdir + mv $(texdir)/$(packagebasename).tar.gz ./ + +# Package into `.zip'. +zip: $(packagecontents) + curdir=$$(pwd) + cd $(texdir) + zip -q -r $(packagebasename).zip $(packagebasename) + cd $$curdir + mv $(texdir)/$(packagebasename).zip ./ + + + + + # Check the version of programs which write their version # ------------------------------------------------------- pvcheck = prog="$(strip $(1))"; \ ver="$(strip $(2))"; \ name="$(strip $(3))"; \ macro="$(strip $(4))"; \ - v=$$($$prog --version | awk '/'$$ver'/{print "y"; exit 0}'); \ + verop="$(strip $(5))"; \ + if [ "x$$verop" = x ]; then V="--version"; else V=$$verop; fi; \ + v=$$($$prog $$V | awk '/'$$ver'/{print "y"; exit 0}'); \ if [ x$$v != xy ]; then \ echo; echo "PIPELINE ERROR: Not running $$name $$ver"; echo; \ exit 1; \ @@ -228,7 +296,12 @@ $(mtexdir)/initialize.tex: | $(mtexdir) echo "\newcommand{\pipelineversion}{$$v}" > $@ @echo "\newcommand{\bdir}{$(BDIR)}" >> $@ - # Versions of programs (same order as 'dependency-versions.mk'). + # Versions of programs (same order as 'dependency-versions.mk'), + # ordered alphabetically (by their executable name). + # --------- Delete for no Gnuastro --------- + $(call pvcheck, astnoisechisel, $(gnuastro-version), Gnuastro, \ + gnuastroversion) + # ------------------------------------------ $(call pvcheck, awk, $(gawk-version), GNU AWK, gawkversion) $(call pvcheck, bash, $(bash-version), GNU Bash, bashversion) $(call pvcheck, cmake, $(cmake-version), CMake, cmakeversion) @@ -237,12 +310,12 @@ $(mtexdir)/initialize.tex: | $(mtexdir) diffutilsversion) $(call pvcheck, find, $(findutils-version), GNU Findutils, \ findutilsversion) - $(call pvcheck, gs, $(ghostscript-version), GPL Ghostscript, \ - ghostscriptversion) $(call pvcheck, git, $(git-version), Git, gitversion) - $(call pvcheck, grep, $(grep-version), GNU Grep, grepversion) $(call pvcheck, glibtool, $(libtool-version), GNU Libtool, \ libtoolversion) + $(call pvcheck, grep, $(grep-version), GNU Grep, grepversion) + $(call pvcheck, gs, $(ghostscript-version), GPL Ghostscript, \ + ghostscriptversion) $(call pvcheck, gzip, $(gzip-version), GNU Gzip, gzipversion) $(call pvcheck, ls, $(coreutils-version), GNU Coreutils, \ coreutilsversion) @@ -254,14 +327,11 @@ $(mtexdir)/initialize.tex: | $(mtexdir) pkgconfigversion) $(call pvcheck, sed, $(sed-version), GNU SED, sedversion) $(call pvcheck, tar, $(tar-version), GNU Tar, tarversion) + $(call pvcheck, unzip, $(unzip-version), Unzip, unzipversion, -v) $(call pvcheck, wget, $(wget-version), GNU Wget, wgetversion) $(call pvcheck, which, $(which-version), GNU Which, whichversion) $(call pvcheck, xz, $(xz-version), XZ Utils, xzversion) - - # --------- Delete for no Gnuastro --------- - $(call pvcheck, astnoisechisel, $(gnuastro-version), Gnuastro, \ - gnuastroversion) - # ------------------------------------------ + $(call pvcheck, zip, $(zip-version), Zip, zipversion, -v) # Bzip2 prints its version in standard error, not standard output! echo "" | bzip2 --version &> $@_bzip2_ver; |