Git commits in slide now have a checksum

The fact that we only displayed the Git checksum before showing it in
the paper could be a little confusing to people not much familiar with
Git. So a commit checksum (taken randomly from the history of these
slides) was added to it.

Also, some minor changes were done here and there.

1 files changed, 77 insertions, 69 deletions

diff --git a/reproducible-paper.tex b/reproducible-paper.tex
index 413b72d..ca039ec 100644
--- a/reproducible-paper.tex
+++ b/reproducible-paper.tex
@@ -27,8 +27,8 @@
 }
 
 %% Set the date and insitutional logos.
-\date{\scriptsize \href{https://ifas5.sciencesconf.org}{5th
-    Indo-French Astronomy School}, \href{http://www.iucaa.in}{IUCAA}, Pune (India),\\August 21st, 2019\\
+\date{\scriptsize August 21st, 2019\\\href{https://ifas5.sciencesconf.org}{5th
+    Indo-French Astronomy School}, \href{http://www.iucaa.in}{IUCAA}, Pune (India),\\
   \vspace{0.1cm} Slides available at
   \textcolor{blue}{\url{http://akhlaghi.org/pdf/reproducible-paper.pdf}}}
 
@@ -100,7 +100,7 @@
 
 
   \newcommand{\imgtdir}{/home/mohammad/documents/personal/professional/astronomy/talks/in-prep/images}
-  \begin{frame}{Reproducibility is critically important for astronomy}
+  \begin{frame}{Reproducibility is critically important in the sciences (example from astronomy)}
     \small
     \begin{columns}
       \column{6cm} Example: Detecting outer regions of M51 in a
@@ -209,56 +209,6 @@
 
 
 
-  \begin{frame}[t]{Types of reproducibility}
-    \vspace{-5mm}
-    \begin{columns}[t]
-      \column{0.5\linewidth}
-      \begin{center}
-        \large\textbf{Hardware/Statistical reproducibility}
-        \rule{0.5\linewidth}{1pt}
-      \end{center}
-      \begin{itemize}
-        \setlength\itemsep{0.5em}
-      \item Involves data \alert{collection}.
-      \item Inherently includes \alert{measurements errors}\\(can
-        never be exactly reproduced).
-      \item Example: Raw telescope image/spectra.
-      \item \alert{\textbf{NOT DISCUSSED HERE.}}
-      \end{itemize}
-
-      \vspace{3.5mm}
-      \begin{center}
-        \vspace{-5mm}
-        \includegraphics[width=0.7\linewidth]{img/hale-prime-focus.jpg}\\
-        \vspace{-0.6mm}
-        \tiny \href{http://slittlefair.staff.shef.ac.uk/teaching/phy217/lectures/telescopes/L07/index.html}{http://slittlefair.staff.shef.ac.uk}
-      \end{center}
-
-      \column{0.5\linewidth}
-      \begin{center}
-        \large\textbf{Software/Deterministic reproducibility}
-        \rule{0.5\linewidth}{1pt}
-      \end{center}
-      \begin{itemize}
-        \setlength\itemsep{1em}
-      \item Involves data \alert{analysis}, or simulations.
-      \item Starts \alert{after} data is collected/digitized.
-      \item Example: $2+2=4$ (i.e., sum of datasets).
-      \item \textbf{\textcolor{green!50!black}{DISCUSSED HERE.}}
-      \end{itemize}
-
-      \centering
-      \vspace{3mm}
-      \includegraphics[width=0.8\linewidth]{img/digital-tunnel.jpg}\\
-      \vspace{-0.6mm}
-      \tiny \href{https://tsongas.com/newsletter_articles/the-new-electronic-version-of-the-advantage/digital-tunnel-wallpaper/}{https://tsongas.com}
-    \end{columns}
-  \end{frame}
-
-
-
-
-
   %% Step-by-step slides.
   \newcommand{\allopacity}{1}
   \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame}
@@ -323,6 +273,8 @@
   \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame}
   \newcommand{\humanerr}{}
   \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame}
+  \newcommand{\confirmbias}{}
+  \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame}
   \newcommand{\depupdate}{}
   \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame}
   \newcommand{\coauth}{}
@@ -399,6 +351,57 @@
 
 
 
+
+  \begin{frame}[t]{Types of reproducibility}
+    \vspace{-5mm}
+    \begin{columns}[t]
+      \column{0.5\linewidth}
+      \begin{center}
+        \large\textbf{Hardware/Statistical reproducibility}
+        \rule{0.5\linewidth}{1pt}
+      \end{center}
+      \begin{itemize}
+        \setlength\itemsep{0.5em}
+      \item Involves data \alert{collection}.
+      \item Inherently includes \alert{measurements errors}\\(can
+        never be exactly reproduced).
+      \item Example: Raw telescope image/spectra.
+      \item \alert{\textbf{NOT DISCUSSED HERE.}}
+      \end{itemize}
+
+      \vspace{3.5mm}
+      \begin{center}
+        \vspace{-5mm}
+        \includegraphics[width=0.7\linewidth]{img/hale-prime-focus.jpg}\\
+        \vspace{-0.6mm}
+        \tiny \href{http://slittlefair.staff.shef.ac.uk/teaching/phy217/lectures/telescopes/L07/index.html}{http://slittlefair.staff.shef.ac.uk}
+      \end{center}
+
+      \column{0.5\linewidth}
+      \begin{center}
+        \large\textbf{Software/Deterministic reproducibility}
+        \rule{0.5\linewidth}{1pt}
+      \end{center}
+      \begin{itemize}
+        \setlength\itemsep{1em}
+      \item Involves data \alert{analysis}, or simulations.
+      \item Starts \alert{after} data is collected/digitized.
+      \item Example: $2+2=4$ (i.e., sum of datasets).
+      \item \textbf{\textcolor{green!50!black}{DISCUSSED HERE.}}
+      \end{itemize}
+
+      \centering
+      \vspace{3mm}
+      \includegraphics[width=0.8\linewidth]{img/digital-tunnel.jpg}\\
+      \vspace{-0.6mm}
+      \tiny \href{https://tsongas.com/newsletter_articles/the-new-electronic-version-of-the-advantage/digital-tunnel-wallpaper/}{https://tsongas.com}
+    \end{columns}
+  \end{frame}
+
+
+
+
+
   \newcommand{\focusonpackages}{}
   \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame}
   \let\focusonpackages\undefined
@@ -847,6 +850,8 @@
 
 
 
+
+
   \begin{frame}{New projects branch from template} \include{tex/git-branch} \end{frame}
   \newcommand{\projinit}{}
   \begin{frame}{New projects branch from template} \include{tex/git-branch} \end{frame}
@@ -860,22 +865,8 @@
   \begin{frame}{New projects branch from template} \include{tex/git-branch} \end{frame}
   \newcommand{\githappy}{}
   \begin{frame}{New projects branch from template} \include{tex/git-branch} \end{frame}
-
-
-
-
-  \begin{frame}{Project source and its execution}
-    \begin{tcolorbox}
-      Programs \textcolor{gray}{[here: Scientific projects]} must be
-      written for \alert{people to read}...
-
-      \hfill ...and only \emph{incidentally} for machines to
-      \emph{execute}.
-
-      \vspace{2mm}
-      \hfill \footnotesize Harold Abelson, Structure and Interpretation of Computer Programs
-    \end{tcolorbox}
-  \end{frame}
+  \newcommand{\gitverified}{}
+  \begin{frame}{New projects branch from template} \include{tex/git-branch} \end{frame}
 
 
 
@@ -913,6 +904,23 @@
 
 
 
+  \begin{frame}{Project source and its execution}
+    \begin{tcolorbox}
+      Programs \textcolor{gray}{[here: Scientific projects]} must be
+      written for \alert{people to read}...
+
+      \hfill ...and only \emph{incidentally} for machines to
+      \emph{execute}.
+
+      \vspace{2mm}
+      \hfill \footnotesize Harold Abelson, Structure and Interpretation of Computer Programs
+    \end{tcolorbox}
+  \end{frame}
+
+
+
+
+
   \begin{frame}{Future prospects...}
     \large Adoption of reproducibility by many researchers will enable
     the following: