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|
# Build the VERY BASIC project software before higher-level ones. Assuming
# minimal/generic Make and Shell.
#
# ------------------------------------------------------------------------
# !!!!! IMPORTANT NOTES !!!!!
#
# This Makefile will be run by the initial `./configure' script. It is not
# included into the project after that.
#
# This Makefile builds very low-level and basic tools like GNU Tar, GNU
# Bash, GNU Make, GCC and etc. Therefore this is the only Makefile in the
# project where you CANNOT assume that GNU Bash or GNU Make are used. After
# this Makefile (where GNU Bash and GNU Make are built), other Makefiles
# can safely assume the fixed version of all these software.
#
# ------------------------------------------------------------------------
#
# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
#
# This Makefile is free software: you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation, either version 3 of the License, or (at your
# option) any later version.
#
# This Makefile is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
# Public License for more details.
#
# A copy of the GNU General Public License is available at
# <http://www.gnu.org/licenses/>.
# Top level environment
include reproduce/software/make/build-rules.mk
include reproduce/software/config/installation/LOCAL.mk
include reproduce/software/config/installation/versions.mk
lockdir = $(BDIR)/locks
tdir = $(BDIR)/software/tarballs
ddir = $(BDIR)/software/build-tmp
idir = $(BDIR)/software/installed
ibdir = $(BDIR)/software/installed/bin
ildir = $(BDIR)/software/installed/lib
ibidir = $(BDIR)/software/installed/version-info/proglib
# We'll need the system's PATH for making links to low-level programs we
# won't be building ourselves.
syspath := $(PATH)
# As we build more programs, we want to use this project's built programs
# and libraries, not the host's.
export CCACHE_DISABLE := 1
export PATH := $(ibdir):$(PATH)
export PKG_CONFIG_PATH := $(ildir)/pkgconfig
export PKG_CONFIG_LIBDIR := $(ildir)/pkgconfig
export LD_LIBRARY_PATH := $(ildir):$(LD_LIBRARY_PATH)
export CPPFLAGS := -I$(idir)/include $(CPPFLAGS)
export LDFLAGS := $(rpath_command) -L$(ildir) $(LDFLAGS)
# Define the top-level basic programs (that don't depend on any other).
top-level-programs = low-level-links wget metastore gcc
all: $(foreach p, $(top-level-programs), $(ibidir)/$(p))
# Tarballs
# --------
#
# Prepare tarballs. Difference with that in `high-level.mk': `.ONESHELL' is
# not recognized by some versions of Make (even older GNU Makes). So we'll
# have to make sure the recipe doesn't break into multiple shell calls (so
# we can preserve the variables).
#
# Software hosted at akhlaghi.org/src: As of our latest check (November
# 2018) their major release tarballs either crash or don't build on some
# systems (for example Make or Gzip), or they don't exist (for example
# Bzip2).
#
# In the first case, we used their Git repo and bootstrapped them (just
# like Gnuastro) and built the most recent tarball off of that. In the case
# of Bzip2: its webpage has expired and doesn't host the data any more. It
# is available on the link below (archive.org):
#
# https://web.archive.org/web/20180624184806/http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz
#
# However, downloading from this link is slow (because its just a link). So
# its easier to just keep a with the others.
$(lockdir): | $(BDIR); mkdir $@
downloadwrapper = ./reproduce/analysis/bash/download-multi-try
tarballs = $(foreach t, bash-$(bash-version).tar.lz \
binutils-$(binutils-version).tar.lz \
bzip2-$(bzip2-version).tar.gz \
cert.pem \
coreutils-$(coreutils-version).tar.xz \
curl-$(curl-version).tar.gz \
diffutils-$(diffutils-version).tar.xz \
file-$(file-version).tar.gz \
findutils-$(findutils-version).tar.lz \
gawk-$(gawk-version).tar.lz \
gcc-$(gcc-version).tar.xz \
git-$(git-version).tar.xz \
gmp-$(gmp-version).tar.lz \
grep-$(grep-version).tar.xz \
gzip-$(gzip-version).tar.gz \
isl-$(isl-version).tar.bz2 \
libbsd-$(libbsd-version).tar.xz \
libtool-$(libtool-version).tar.xz \
lzip-$(lzip-version).tar.gz \
m4-$(m4-version).tar.gz \
make-$(make-version).tar.lz \
metastore-$(metastore-version).tar.gz \
mpfr-$(mpfr-version).tar.xz \
mpc-$(mpc-version).tar.gz \
ncurses-$(ncurses-version).tar.gz \
openssl-$(openssl-version).tar.gz \
patchelf-$(patchelf-version).tar.gz \
pkg-config-$(pkgconfig-version).tar.gz \
readline-$(readline-version).tar.gz \
sed-$(sed-version).tar.xz \
tar-$(tar-version).tar.gz \
unzip-$(unzip-version).tar.gz \
wget-$(wget-version).tar.lz \
which-$(which-version).tar.gz \
xz-$(xz-version).tar.gz \
zip-$(zip-version).tar.gz \
zlib-$(zlib-version).tar.gz \
, $(tdir)/$(t) )
$(tarballs): $(tdir)/%: | $(lockdir)
if [ -f $(DEPENDENCIES-DIR)/$* ]; then \
cp $(DEPENDENCIES-DIR)/$* $@; \
else \
n=$$(echo $* | sed -e's/[0-9\-]/ /g' \
-e's/\./ /g' \
| awk '{print $$1}' ); \
\
mergenames=1; \
if [ $$n = bash ]; then w=http://akhlaghi.org/src; \
elif [ $$n = binutils ]; then w=http://ftp.gnu.org/gnu/binutils; \
elif [ $$n = bzip ]; then w=http://akhlaghi.org/src; \
elif [ $$n = cert ]; then w=http://akhlaghi.org/src; \
elif [ $$n = coreutils ]; then w=http://ftp.gnu.org/gnu/coreutils;\
elif [ $$n = curl ]; then w=https://curl.haxx.se/download; \
elif [ $$n = diffutils ]; then w=http://ftp.gnu.org/gnu/diffutils;\
elif [ $$n = file ]; then w=ftp://ftp.astron.com/pub/file; \
elif [ $$n = findutils ]; then w=http://akhlaghi.org/src; \
elif [ $$n = gawk ]; then w=http://ftp.gnu.org/gnu/gawk; \
elif [ $$n = gcc ]; then w=http://ftp.gnu.org/gnu/gcc/gcc-$(gcc-version); \
elif [ $$n = git ]; then w=http://mirrors.edge.kernel.org/pub/software/scm/git; \
elif [ $$n = gmp ]; then w=https://gmplib.org/download/gmp; \
elif [ $$n = grep ]; then w=http://ftp.gnu.org/gnu/grep; \
elif [ $$n = gzip ]; then w=http://ftp.gnu.org/gnu/gzip; \
elif [ $$n = isl ]; then w=ftp://gcc.gnu.org/pub/gcc/infrastructure; \
elif [ $$n = libbsd ]; then w=http://libbsd.freedesktop.org/releases; \
elif [ $$n = libtool ]; then w=http://ftp.gnu.org/gnu/libtool; \
elif [ $$n = lzip ]; then w=http://download.savannah.gnu.org/releases/lzip; \
elif [ $$n = m ]; then \
mergenames=0; \
w=http://akhlaghi.org/src/m4-1.4.18-patched.tar.gz; \
elif [ $$n = make ]; then w=http://akhlaghi.org/src; \
elif [ $$n = metastore ]; then w=http://akhlaghi.org/src; \
elif [ $$n = mpfr ]; then w=http://www.mpfr.org/mpfr-current;\
elif [ $$n = mpc ]; then w=http://ftp.gnu.org/gnu/mpc; \
elif [ $$n = ncurses ]; then w=http://ftp.gnu.org/gnu/ncurses; \
elif [ $$n = openssl ]; then w=http://www.openssl.org/source; \
elif [ $$n = patchelf ]; then w=http://nixos.org/releases/patchelf/patchelf-$(patchelf-version); \
elif [ $$n = pkg ]; then w=http://pkg-config.freedesktop.org/releases; \
elif [ $$n = readline ]; then w=http://ftp.gnu.org/gnu/readline; \
elif [ $$n = sed ]; then w=http://ftp.gnu.org/gnu/sed; \
elif [ $$n = tar ]; then w=http://ftp.gnu.org/gnu/tar; \
elif [ $$n = unzip ]; then \
mergenames=0; v=$$(echo $(unzip-version) | sed -e's/\.//'); \
w=ftp://ftp.info-zip.org/pub/infozip/src/unzip$$v.tgz; \
elif [ $$n = wget ]; then w=http://ftp.gnu.org/gnu/wget; \
elif [ $$n = which ]; then w=http://ftp.gnu.org/gnu/which; \
elif [ $$n = xz ]; then w=http://tukaani.org/xz; \
elif [ $$n = zip ]; then \
mergenames=0; v=$$(echo $(zip-version) | sed -e's/\.//'); \
w=ftp://ftp.info-zip.org/pub/infozip/src/zip$$v.tgz; \
elif [ $$n = zlib ]; then w=http://www.zlib.net; \
else \
echo; echo; echo; \
echo "'$$n' not a basic dependency name (for downloading)." \
echo; echo; echo; \
exit 1; \
fi; \
\
if [ $$mergenames = 1 ]; then tarballurl=$$w/"$*"; \
else tarballurl=$$w; \
fi; \
\
echo "Downloading $$tarballurl"; \
if [ -f $(ibdir)/wget ]; then \
downloader="wget --no-use-server-timestamps -O"; \
else \
downloader="$(DOWNLOADER)"; \
fi; \
\
touch $(lockdir)/download; \
$(downloadwrapper) "$$downloader" $(lockdir)/download \
$$tarballurl $@; \
fi
# Low-level (not built) programs
# ------------------------------
#
# For the time being, we aren't building a local C compiler, but we'll use
# any C compiler that the system already has and just make a symbolic link
# to it.
#
# ccache: ccache acts like a wrapper over the C compiler and is made to
# avoid/speed-up compiling of identical files in a system (it is commonly
# used on large servers). It actually makes `gcc' or `g++' a symbolic link
# to itself so it can control them internally. So, for our purpose here, it
# is very annoying and can cause many complications. We thus remove any
# part of PATH of that has `ccache' in it before making symbolic links to
# the programs we are not building ourselves.
makelink = origpath="$$PATH"; \
export PATH=$$(echo $(syspath) | tr : '\n' | grep -v ccache \
| tr '\n' :); \
a=$$(which $(1) 2> /dev/null); \
if [ -e $(ibdir)/$(1) ]; then rm $(ibdir)/$(1); fi; \
if [ x$$a = x ]; then \
if [ "x$(strip $(2))" = xmandatory ]; then \
echo "'$(1)' is necessary for higher-level tools."; \
echo "Please install it for the configuration to continue."; \
exit 1; \
fi; \
else \
ln -s $$a $(ibdir)/$(1); \
fi; \
export PATH="$$origpath"
$(ibdir) $(ildir):; mkdir $@
$(ibidir)/low-level-links: | $(ibdir) $(ildir)
# Not-installed (but necessary in some cases) compilers.
# Clang is necessary for CMake.
$(call makelink,clang)
$(call makelink,clang++)
# Mac OS specific
$(call makelink,sysctl)
$(call makelink,sw_vers)
$(call makelink,dsymutil)
$(call makelink,install_name_tool)
# On Mac OS, libtool is different compared to GNU Libtool. The
# libtool we'll build in the high-level dependencies has the
# executable name `glibtool'.
$(call makelink,libtool)
# GNU Gettext (translate messages)
$(call makelink,msgfmt)
# Needed by TeXLive specifically.
$(call makelink,perl)
# Necessary libraries:
# Libdl (for dynamic loading libraries at runtime)
# POSIX Threads library for multi-threaded programs.
for l in dl pthread; do \
rm -f $(ildir)/lib$$l*; \
if [ -f /usr/lib/lib$$l.a ]; then \
ln -s /usr/lib/lib$$l.* $(ildir)/; \
fi; \
done
# We want this to be empty (so it doesn't interefere with the other
# files in `ibidir'.
touch $@
# Level 1 (MOST BASIC): Compression programs
# ------------------------------------------
#
# The first set of programs to be built are those that we need to unpack
# the source code tarballs of each program. First, we'll build the
# necessary programs, then we'll build GNU Tar.
$(ibidir)/gzip: $(tdir)/gzip-$(gzip-version).tar.gz
$(call gbuild, $<, gzip-$(gzip-version), static, , V=1) \
&& echo "GNU Gzip $(gzip-version)" > $@
# GNU Lzip: For a static build, the `-static' flag should be given to
# LDFLAGS on the command-line (not from the environment).
ifeq ($(static_build),yes)
lzipconf="LDFLAGS=-static"
else
lzipconf=
endif
$(ibidir)/lzip: $(tdir)/lzip-$(lzip-version).tar.gz
$(call gbuild, $<, lzip-$(lzip-version), , $(lzipconf)) \
&& echo "Lzip $(lzip-version)" > $@
$(ibidir)/xz: $(tdir)/xz-$(xz-version).tar.gz
$(call gbuild, $<, xz-$(xz-version), static) \
&& echo "XZ Utils $(xz-version)" > $@
$(ibidir)/bzip2: $(tdir)/bzip2-$(bzip2-version).tar.gz
# Bzip2 doesn't have a `./configure' script, and its Makefile
# doesn't build a shared library. So we can't use the `gbuild'
# function here and we need to take some extra steps (inspired
# from the "Linux from Scratch" guide for Bzip2):
# 1) The `sed' call is for relative installed symbolic links.
# 2) The special Makefile-libbz2_so builds shared libraries.
#
# NOTE: the major version number appears in the final symbolic
# link.
tdir=bzip2-$(bzip2-version); \
if [ $(static_build) = yes ]; then \
makecommand="make LDFLAGS=-static"; \
makeshared="echo no-shared"; \
else \
makecommand="make"; \
if [ x$(on_mac_os) = xyes ]; then \
makeshared="echo no-shared"; \
else \
makeshared="make -f Makefile-libbz2_so"; \
fi; \
fi; \
cd $(ddir) && rm -rf $$tdir && tar xf $< && cd $$tdir \
&& sed -e 's@\(ln -s -f \)$$(PREFIX)/bin/@\1@' Makefile \
> Makefile.sed \
&& mv Makefile.sed Makefile \
&& $$makeshared \
&& cp -a libbz2* $(ildir)/ \
&& make clean \
&& $$makecommand \
&& make install PREFIX=$(idir) \
&& cd .. \
&& rm -rf $$tdir \
&& cd $(ildir) \
&& ln -fs libbz2.so.1.0 libbz2.so \
&& echo "Bzip2 $(bzip2-version)" > $@
$(ibidir)/unzip: $(tdir)/unzip-$(unzip-version).tar.gz
v=$$(echo $(unzip-version) | sed -e's/\.//'); \
$(call gbuild, $<, unzip$$v, static,, \
-f unix/Makefile generic_gcc \
CFLAGS="-DBIG_MEM -DMMAP",,pwd, \
-f unix/Makefile \
BINDIR=$(ibdir) MANDIR=$(idir)/man/man1 ) \
&& echo "Unzip $(unzip-version)" > $@
$(ibidir)/zip: $(tdir)/zip-$(zip-version).tar.gz
v=$$(echo $(zip-version) | sed -e's/\.//'); \
$(call gbuild, $<, zip$$v, static,, \
-f unix/Makefile generic_gcc \
CFLAGS="-DBIG_MEM -DMMAP",,pwd, \
-f unix/Makefile \
BINDIR=$(ibdir) MANDIR=$(idir)/man/man1 ) \
&& echo "Zip $(zip-version)" > $@
# Some programs (like Wget and CMake) that use zlib need it to be dynamic
# so they use our custom build. So we won't force a static-only build.
#
# Note for a static-only build: Zlib's `./configure' doesn't use Autoconf's
# configure script, it just accepts a direct `--static' option.
$(ibidir)/zlib: $(tdir)/zlib-$(zlib-version).tar.gz
$(call gbuild, $<, zlib-$(zlib-version)) \
&& echo "Zlib $(zlib-version)" > $@
# GNU Tar: When built statically, tar gives a segmentation fault on
# unpacking Bash. So we'll build it dynamically. Note that technically, zip
# and unzip aren't dependencies of Tar, but for a clean build, we'll set
# Tar to be the last compression-related software (the first-set of
# software to be built).
$(ibidir)/tar: $(tdir)/tar-$(tar-version).tar.gz \
$(ibidir)/bzip2 \
$(ibidir)/unzip \
$(ibidir)/gzip \
$(ibidir)/lzip \
$(ibidir)/zlib \
$(ibidir)/zip \
$(ibidir)/xz
# Since all later programs depend on Tar, the configuration will be
# stuck here, only making Tar. So its more efficient to built it on
# multiple threads (when the user's Make doesn't pass down the
# number of threads).
$(call gbuild, $<, tar-$(tar-version), , , -j$(numthreads) V=1) \
&& echo "GNU Tar $(tar-version)" > $@
# Level 2 (SECOND MOST BASIC): Bash and Make
# ------------------------------------------
#
# GNU Make and GNU Bash are the second layer that we'll need to build the
# basic dependencies.
#
# Unfortunately Make needs dynamic linking in two instances: when loading
# objects (dynamically linked libraries), or when using the `getpwnam'
# function (for tilde expansion). The first can be disabled with
# `--disable-load', but unfortunately I don't know any way to fix the
# second. So, we'll have to build it dynamically for now.
$(ibidir)/make: $(tdir)/make-$(make-version).tar.lz \
$(ibidir)/tar
# See Tar's comments for the `-j' option.
$(call gbuild, $<, make-$(make-version), , , -j$(numthreads)) \
&& echo "GNU Make $(make-version)" > $@
$(ibidir)/ncurses: $(tdir)/ncurses-$(ncurses-version).tar.gz \
$(ibidir)/make
# Delete the library that will be installed (so we can make sure
# the build process completed afterwards and reset the links).
rm -f $(ildir)/libncursesw*
# Delete the (possibly existing) low-level programs that depend on
# `readline', and thus `ncurses'. Since these programs are actually
# used during the building of `ncurses', we need to delete them so
# the build process doesn't use the project's Bash and AWK, but the
# host's.
rm -f $(ibdir)/bash* $(ibdir)/awk* $(ibdir)/gawk*
# Standard build process.
$(call gbuild, $<, ncurses-$(ncurses-version), static, \
--with-shared --enable-rpath --without-normal \
--without-debug --with-cxx-binding \
--with-cxx-shared --enable-widec --enable-pc-files \
--with-pkg-config=$(ildir)/pkgconfig )
# Unfortunately there are many problems with `ncurses' using
# "normal" (or 8-bit) characters. The standard way that will work
# is to build it with wide character mode as you see above in the
# configuration (or the `w' prefix you see below). Also, most
# programs (and in particular Bash and AWK), first look for other
# (mostly obsolete) libraries like tinfo, which define the same
# symbols. The links below address both situations: we need to fool
# higher-level packages to find this library even if they aren't
# explicitly mentioning its name correctly (as a value to `-l' at
# link time in their configure scripts).
#
# This part is taken from the Arch Linux build script[1], then
# extended to Mac thanks to Homebrew's script [2].
#
# [1] https://git.archlinux.org/svntogit/packages.git/tree/trunk/PKGBUILD?h=packages/ncurses
# [2] https://github.com/Homebrew/homebrew-core/blob/master/Formula/ncurses.rb
#
# Since we can't have comments, in the connected script, here is a
# summary:
#
# 1. We find the actual suffix of the library, from the file that
# is not a symbolic link (starting with `-' in the output of
# `ls -l').
#
# 2. We make symbolic links to all the "ncurses", "ncurses++",
# "form", "panel" and "menu" libraries to point to their
# "wide" (character) library.
#
# 3. We make symbolic links to the "tic" and "tinfo" libraries to
# point to the same `libncursesw' library.
#
# 4. Some programs link with "curses" (not "ncurses", notice the
# starting "n"), so we'll also make links for these to point
# to the `libncursesw' library.
#
# 5. A link is made to also be able to include files from the
# `ncurses' headers.
if [ x$(on_mac_os) = xyes ]; then so="dylib"; else so="so"; fi; \
if [ -f $(ildir)/libncursesw.$$so ]; then \
\
sov=$$(ls -l $(ildir)/libncursesw* \
| awk '/^-/{print $$NF}' \
| sed -e's|'$(ildir)/libncursesw.'||'); \
\
cd "$(ildir)"; \
for lib in ncurses ncurses++ form panel menu; do \
ln -fs lib$$lib"w".$$sov lib$$lib.$$so; \
ln -fs $(ildir)/pkgconfig/"$$lib"w.pc pkgconfig/$$lib.pc; \
done; \
for lib in tic tinfo; do \
ln -fs libncursesw.$$sov lib$$lib.$$so; \
ln -fs libncursesw.$$sov lib$$lib.$$sov; \
ln -fs $(ildir)/pkgconfig/ncursesw.pc pkgconfig/$$lib.pc; \
done; \
ln -fs libncursesw.$$sov libcurses.$$so; \
ln -fs libncursesw.$$sov libcursesw.$$sov; \
ln -fs $(ildir)/pkgconfig/ncursesw.pc pkgconfig/curses.pc; \
ln -fs $(ildir)/pkgconfig/ncursesw.pc pkgconfig/cursesw.pc; \
\
ln -fs $(idir)/include/ncursesw $(idir)/include/ncurses; \
echo "GNU NCURSES $(ncurses-version)" > $@; \
else \
exit 1; \
fi
$(ibidir)/readline: $(tdir)/readline-$(readline-version).tar.gz \
$(ibidir)/ncurses
$(call gbuild, $<, readline-$(readline-version), static, \
--with-curses --disable-install-examples, \
SHLIB_LIBS="-lncursesw" ) \
&& echo "GNU Readline $(readline-version)" > $@
$(ibidir)/patchelf: $(tdir)/patchelf-$(patchelf-version).tar.gz \
$(ibidir)/make
$(call gbuild, $<, patchelf-$(patchelf-version), static) \
&& echo "PatchELF $(patchelf-version)" > $@
# IMPORTANT: Even though we have enabled `rpath', Bash doesn't write the
# absolute adddress of the libraries it depends on! Therefore, if we
# configure Bash with `--with-installed-readline' (so the installed version
# of Readline, that we build below as a prerequisite or AWK, is used) and
# you run `ldd $(ibdir)/bash' on the resulting binary, it will say that it
# is linking with the system's `readline'. But if you run that same command
# within a rule in this project, you'll see that it is indeed linking with
# our own built readline.
#
# Unfortunately Bash doesn't maintain a Git repository and minor fixes are
# released as patches. Therefore we'll need to make our own fully-working
# and updated tarball to build the proper version of Bash. You download and
# apply them to the original tarball and make a new one with the following
# series of commands (just replace `NUMBER' with the total number of
# patches that you want to apply).
#
# $ number=NUMBER
# $ tar xf bash-5.0.tar.gz
# $ cd bash-5.0
# $ for i in $(seq 1 $number); do \
# pname=bash50-$(printf "%03d" $i); \
# wget http://ftp.gnu.org/gnu/bash/bash-5.0-patches/$pname -O ../$pname;\
# patch -p0 -i ../$pname; \
# done
# $ cd ..
# $ mv bash-5.0 bash-5.0.$number
# $ tar cf bash-5.0.$number.tar bash-5.0.$number
# $ lzip --best bash-5.0.$number.tar
# $ rm bash50-*
ifeq ($(on_mac_os),yes)
needpatchelf =
else
needpatchelf = $(ibidir)/patchelf
endif
$(ibidir)/bash: $(tdir)/bash-$(bash-version).tar.lz \
$(ibidir)/readline \
$(needpatchelf)
# Delete the (possibly) existing Bash executable.
rm -f $(ibdir)/bash
# Build Bash. Note that we aren't building Bash with
# `--with-installed-readline'. This is because (as described above)
# Bash needs the `LD_LIBRARY_PATH' set properly before it is
# run. Within a recipe, things are fine (we do set
# `LD_LIBRARY_PATH'). However, Make will also call the shell
# outside of the recipe (for example in the `foreach' Make
# function!). In such cases, our new `LD_LIBRARY_PATH' is not set.
# This will cause a crash in the shell and thus the Makefile,
# complaining that it can't find `libreadline'. Therefore, even
# though we build readline below, we won't link Bash with an
# external readline.
#
# Bash has many `--enable' features which are already enabled by
# default. As described in the manual, they are mainly useful when
# you disable them all with `--enable-minimal-config' and enable a
# subset using the `--enable' options.
if [ "x$(static_build)" = xyes ]; then stopt="--enable-static-link";\
else stopt=""; \
fi; \
$(call gbuild, $<, bash-$(bash-version),, \
--with-installed-readline=$(ildir) $$stopt )
# Atleast on GNU/Linux systems, Bash doesn't include RPATH by
# default. So, we have to manually include it, currently we are
# only doing this on GNU/Linux systems (using the `patchelf'
# program).
if [ "x$(needpatchelf)" != x ]; then \
if [ -f $(ibdir)/bash ]; then \
$(ibdir)/patchelf --set-rpath $(ildir) $(ibdir)/bash; fi \
fi
# To be generic, some systems use the `sh' command to call the
# shell. By convention, `sh' is just a symbolic link to the
# preferred shell executable. So we'll define `$(ibdir)/sh' as a
# symbolic link to the Bash that we just built and installed.
#
# Just to be sure that the installation step above went well,
# before making the link, we'll see if the file actually exists
# there.
if [ -f $(ibdir)/bash ]; then \
ln -fs $(ibdir)/bash $(ibdir)/sh; \
echo "GNU Bash $(bash-version)" > $@; \
else \
echo "GNU Bash not built!"; exit 1; fi
# Downloaders
# -----------
# cURL
#
# cURL can optionally link with many different network-related libraries on
# the host system that we are not yet building in the template. Many of
# these are not relevant to most science projects, so we are explicitly
# using `--without-XXX' or `--disable-XXX' so cURL doesn't link with
# them. Note that if it does link with them, the configuration will crash
# when the library is updated/changed by the host, and the whole purpose of
# this project is avoid dependency on the host as much as possible.
$(ibidir)/curl: $(tdir)/curl-$(curl-version).tar.gz \
$(ibidir)/openssl
$(call gbuild, $<, curl-$(curl-version), , \
LIBS="-pthread" \
--with-zlib=$(ildir) \
--with-ssl=$(idir) \
--without-mesalink \
--with-ca-fallback \
--without-librtmp \
--without-libidn2 \
--without-wolfssl \
--without-brotli \
--without-gnutls \
--without-cyassl \
--without-libpsl \
--without-axtls \
--disable-ldaps \
--disable-ldap \
--without-nss, V=1) \
&& echo "cURL $(curl-version)" > $@
# OpenSSL
#
# Some programs/libraries later need dynamic linking. So we'll build libssl
# (and libcrypto) dynamically also.
#
# Until we find a nice and generic way to create an updated CA file in the
# project, the certificates will be available in a file for this project
# along with the other tarballs.
#
# In case you do want a static OpenSSL and libcrypto, then uncomment the
# following conditional and put $(openssl-static) in the configure options.
#
#ifeq ($(static_build),yes)
#openssl-static = no-dso no-dynamic-engine no-shared
#endif
$(idir)/etc:; mkdir $@
$(ibidir)/openssl: $(tdir)/openssl-$(openssl-version).tar.gz \
$(tdir)/cert.pem \
$(ibidir)/bash | $(idir)/etc
# According to OpenSSL's Wiki (link bellow), it can't automatically
# detect Mac OS's structure. It will need some help. So we'll use
# the `on_mac_os' Make variable that we defined in the configure
# script and help it with some extra configuration options and an
# environment variable.
#
# https://wiki.openssl.org/index.php/Compilation_and_Installation
if [ x$(on_mac_os) = xyes ]; then \
export KERNEL_BITS=64; \
copt="shared no-ssl2 no-ssl3 enable-ec_nistp_64_gcc_128"; \
fi; \
$(call gbuild, $<, openssl-$(openssl-version), , \
zlib \
$$copt \
$(rpath_command) \
--openssldir=$(idir)/etc/ssl \
--with-zlib-lib=$(ildir) \
--with-zlib-include=$(idir)/include, , , \
./config ) && \
cp $(tdir)/cert.pem $(idir)/etc/ssl/cert.pem; \
if [ $$? = 0 ]; then \
if [ x$(on_mac_os) = xyes ]; then \
echo "No need to fix rpath in libssl"; \
else \
patchelf --set-rpath $(ildir) $(ildir)/libssl.so; \
fi; \
echo "OpenSSL $(openssl-version)" > $@; \
fi
# GNU Wget
#
# Note that on some systems (for example GNU/Linux) Wget needs to explicity
# link with `libdl', but on others (for example Mac OS) it doesn't. We
# check this at configure time and define the `needs_ldl' variable.
#
# Also note that since Wget needs to load outside libraries dynamically, it
# gives a segmentation fault when built statically.
#
# There are many network related libraries that we are currently not
# building as part of this project. So to avoid too much dependency on the
# host system (especially a crash when these libraries are updated on the
# host), they are disabled here.
$(ibidir)/wget: $(tdir)/wget-$(wget-version).tar.lz \
$(ibidir)/pkg-config \
$(ibidir)/openssl
libs="-pthread"; \
if [ x$(needs_ldl) = xyes ]; then libs="$$libs -ldl"; fi; \
$(call gbuild, $<, wget-$(wget-version), , \
LIBS="$$LIBS $$libs" \
--with-libssl-prefix=$(idir) \
--with-ssl=openssl \
--with-openssl=yes \
--without-metalink \
--without-libuuid \
--without-libpsl \
--without-libidn \
--disable-pcre2 \
--disable-pcre \
--disable-iri ) \
&& echo "GNU Wget $(wget-version)" > $@
# Basic command-line tools and their dependencies
# -----------------------------------------------
#
# These are basic programs which are commonly necessary in the build
# process of the higher-level programs and libraries. Note that during the
# building of those higher-level programs (after this Makefile finishes),
# there is no access to the system's PATH.
$(ibidir)/coreutils: $(tdir)/coreutils-$(coreutils-version).tar.xz \
$(ibidir)/openssl
# Coreutils will use the hashing features of OpenSSL's `libcrypto'.
# See Tar's comments for the `-j' option.
$(call gbuild, $<, coreutils-$(coreutils-version), static, \
LDFLAGS="$(LDFLAGS)" CPPFLAGS="$(CPPFLAGS)" \
--enable-rpath --disable-silent-rules --with-openssl, \
-j$(numthreads)) \
&& echo "GNU Coreutils $(coreutils-version)" > $@
$(ibidir)/diffutils: $(tdir)/diffutils-$(diffutils-version).tar.xz \
$(ibidir)/bash
$(call gbuild, $<, diffutils-$(diffutils-version), static, , V=1) \
&& echo "GNU Diffutils $(diffutils-version)" > $@
$(ibidir)/findutils: $(tdir)/findutils-$(findutils-version).tar.lz \
$(ibidir)/bash
$(call gbuild, $<, findutils-$(findutils-version), static, , V=1) \
&& echo "GNU Findutils $(findutils-version)" > $@
$(ibidir)/gawk: $(tdir)/gawk-$(gawk-version).tar.lz \
$(ibidir)/bash \
$(ibidir)/mpfr \
$(ibidir)/gmp
# AWK doesn't include RPATH by default, so we'll have to manually
# include it using the `patchelf' program (which was a dependency
# of Bash). Just note that AWK produces two executables (for
# example `gawk-4.2.1' and `gawk') and a symbolic link `awk' to one
# of those executables.
$(call gbuild, $<, gawk-$(gawk-version), static, \
--with-readline=$(idir)) \
&& if [ "x$(needpatchelf)" != x ]; then \
if [ -f $(ibdir)/gawk ]; then \
$(ibdir)/patchelf --set-rpath $(ildir) $(ibdir)/gawk; \
fi; \
if [ -f $(ibdir)/gawk-$(gawk-version) ]; then \
$(ibdir)/patchelf --set-rpath $(ildir) \
$(ibdir)/gawk-$(gawk-version); \
fi; \
fi \
&& echo "GNU AWK $(gawk-version)" > $@
$(ibidir)/git: $(tdir)/git-$(git-version).tar.xz \
$(ibidir)/curl
$(call gbuild, $<, git-$(git-version), static, \
--without-tcltk --with-shell=$(ibdir)/bash, \
V=1) \
&& echo "Git $(git-version)" > $@
$(ibidir)/gmp: $(tdir)/gmp-$(gmp-version).tar.lz \
$(ibidir)/bash
$(call gbuild, $<, gmp-$(gmp-version), static, , , make check) \
&& echo "GNU Multiple Precision Arithmetic Library $(gmp-version)" > $@
# On Mac OS, libtool does different things, so to avoid confusion, we'll
# prefix GNU's libtool executables with `glibtool'.
$(ibidir)/glibtool: $(tdir)/libtool-$(libtool-version).tar.xz \
$(ibidir)/m4
$(call gbuild, $<, libtool-$(libtool-version), static, \
--program-prefix=g) \
&& echo "GNU Libtool $(libtool-version)" > $@
$(ibidir)/grep: $(tdir)/grep-$(grep-version).tar.xz \
$(ibidir)/bash
$(call gbuild, $<, grep-$(grep-version), static) \
&& echo "GNU Grep $(grep-version)" > $@
$(ibidir)/libbsd: $(tdir)/libbsd-$(libbsd-version).tar.xz \
$(ibidir)/bash
$(call gbuild, $<, libbsd-$(libbsd-version), static,,V=1) \
&& echo "Libbsd $(libbsd-version)" > $@
$(ibidir)/m4: $(tdir)/m4-$(m4-version).tar.gz \
$(ibidir)/bash
$(call gbuild, $<, m4-$(m4-version), static) \
&& echo "GNU M4 $(m4-version)" > $@
# Metastore is used (through a Git hook) to restore the source modification
# dates of files after a Git checkout. Another Git hook saves all file
# metadata just before a commit (to allow restoration after a
# checkout). Since this project is managed in Makefiles, file modification
# dates are critical to not having to redo the whole analysis after
# checking out between branches.
#
# Note that we aren't using the standard version of Metastore, but a fork
# of it that is maintained in this repository:
# https://gitlab.com/makhlaghi/metastore-fork
#
# Note that the prerequisites `coreutils', `gawk' and `sed' are not
# metastore oficial dependencies, but they are necessaries to run our steps
# before and after the installation.
#
# Libbsd is not necessary on macOS systems, because macOS is already a
# BSD-based distribution. But on GNU/Linux systems, it is necessary.
ifeq ($(on_mac_os),yes)
needlibbsd =
else
needlibbsd = $(ibidir)/libbsd
endif
$(ibidir)/metastore: $(tdir)/metastore-$(metastore-version).tar.gz \
$(ibidir)/coreutils \
$(ibidir)/gawk \
$(ibidir)/git \
$(ibidir)/sed \
$(needlibbsd)
# The build command below will change the current directory of this
# build, so we'll fix its value here.
current_dir=$$(pwd)
# Metastore doesn't have any `./configure' script. So we'll just
# call `pwd' as a place-holder for the `./configure' command.
#
# File attributes are also not available on some systems, since the
# main purpose here is modification dates (and not attributes),
# we'll also set the `NO_XATTR' flag.
$(call gbuild, $<, metastore-$(metastore-version), static,, \
NO_XATTR=1 V=1,,pwd,PREFIX=$(idir))
# Write the relevant hooks into this system's Git hooks, so Git
# calls metastore properly on every commit and every checkout.
#
# Note that the -O and -G options used here are currently only in a
# fork of `metastore' currently hosted at:
# https://github.com/mohammad-akhlaghi/metastore
user=$$(whoami); \
group=$$(groups | awk '{print $$1}'); \
cd $$current_dir; \
if [ -f $(ibdir)/metastore ]; then \
for f in pre-commit post-checkout; do \
sed -e's|@USER[@]|'$$user'|g' \
-e's|@GROUP[@]|'$$group'|g' \
-e's|@BINDIR[@]|$(ibdir)|g' \
-e's|@TOP_PROJECT_DIR[@]|'$$current_dir'|g' \
reproduce/software/bash/git-$$f > .git/hooks/$$f; \
chmod +x .git/hooks/$$f; \
echo "Metastore (forked) $(metastore-version)" > $@; \
done; \
else \
echo; echo; echo; \
echo "*****************"; \
echo "metastore couldn't be installed!"; \
echo; \
echo "Its used for preserving timestamps on Git commits."; \
echo "Its useful for development, not simple running of "; \
echo "the project. So we won't stop the configuration "; \
echo "because it wasn't built."; \
echo "*****************"; \
fi
$(ibidir)/mpfr: $(tdir)/mpfr-$(mpfr-version).tar.xz \
$(ibidir)/gmp
$(call gbuild, $<, mpfr-$(mpfr-version), static, , , make check) \
&& echo "GNU Multiple Precision Floating-Point Reliably $(mpfr-version)" > $@
$(ibidir)/pkg-config: $(tdir)/pkg-config-$(pkgconfig-version).tar.gz \
$(ibidir)/bash
# Some Mac OS systems may have a version of the GNU C Compiler
# (GCC) installed that doesn't support some necessary features of
# building Glib (as part of pkg-config). So to be safe, for Mac
# systems, we'll make sure it will use LLVM's Clang.
if [ x$(on_mac_os) = xyes ]; then export compiler="CC=clang"; \
else export compiler=""; \
fi; \
$(call gbuild, $<, pkg-config-$(pkgconfig-version), static, \
$$compiler --with-internal-glib \
--with-pc-path=$(ildir)/pkgconfig) \
&& echo "pkg-config $(pkgconfig-version)" > $@
$(ibidir)/sed: $(tdir)/sed-$(sed-version).tar.xz \
$(ibidir)/bash
$(call gbuild, $<, sed-$(sed-version), static) \
&& echo "GNU Sed $(sed-version)" > $@
$(ibidir)/which: $(tdir)/which-$(which-version).tar.gz \
$(ibidir)/bash
$(call gbuild, $<, which-$(which-version), static) \
&& echo "GNU Which $(which-version)" > $@
# GCC and its prerequisites
# -------------------------
#
# Binutils' assembler (`as') and linker (`ld') will conflict with other
# compilers. So until then, on Mac systems we'll use the host opertating
# system's Binutils equivalents by just making links.
ifeq ($(on_mac_os),yes)
binutils-prerequisites =
else
binutils-prerequisites = $(tdir)/binutils-$(binutils-version).tar.lz \
$(ibidir)/bash
endif
$(ibidir)/binutils: $(binutils-prerequisites)
if [ x$(on_mac_os) = xyes ]; then \
$(call makelink,as) \
$(call makelink,ar) \
$(call makelink,ld) \
$(call makelink,nm) \
$(call makelink,ps) \
$(call makelink,ranlib) \
echo "" > $@; \
else \
$(call gbuild, $<, binutils-$(binutils-version), static) \
&& echo "GNU Binutils $(binutils-version)" > $@; \
fi
# `file' is not a prerequisite of GCC. However, since it is low level, it is
# set as a prerequisite of GCC to have it installed.
$(ibidir)/file: $(tdir)/file-$(file-version).tar.gz \
$(ibidir)/bash
$(call gbuild, $<, file-$(file-version), static) \
&& echo "File $(file-version)" > $@
$(ibidir)/isl: $(tdir)/isl-$(isl-version).tar.bz2 \
$(ibidir)/gmp
$(call gbuild, $<, isl-$(isl-version), static) \
&& echo "GNU Integer Set Library $(isl-version)" > $@
$(ibidir)/mpc: $(tdir)/mpc-$(mpc-version).tar.gz \
$(ibidir)/mpfr
$(call gbuild, $<, mpc-$(mpc-version), static, , , make check) \
&& echo "GNU Multiple Precision Complex library" > $@
# We are having issues with `libiberty' (part of GCC) on Mac. So for now,
# GCC won't be built there. Since almost no natural science paper's
# processing depends so strongly on the compiler used, for now, this isn't
# a bad assumption, but we are indeed searching for a solution.
#
# Based on the GCC manual, the GCC build can benefit from a GNU
# environment. So, we'll build GCC after building all the basic tools that
# are often used in a configure and build scripts of GCC components.
#
# Objective C and Objective C++ is necessary for installing `matplotlib'.
#
# We are currently having problems installing GCC on macOS, so for the time
# being, if the project is being run on a macOS, we'll just set a link.
ifeq ($(host_cc),1)
gcc-prerequisites =
else
gcc-prerequisites = $(tdir)/gcc-$(gcc-version).tar.xz \
$(ibidir)/binutils \
$(ibidir)/isl \
$(ibidir)/mpc
endif
$(ibidir)/gcc: $(gcc-prerequisites) \
$(ibidir)/sed \
$(ibidir)/bash \
$(ibidir)/file \
$(ibidir)/gawk \
$(ibidir)/grep \
$(ibidir)/which \
$(ibidir)/glibtool \
$(ibidir)/binutils \
$(ibidir)/coreutils \
$(ibidir)/diffutils \
$(ibidir)/findutils
# GCC builds is own libraries in '$(idir)/lib64'. But all other
# libraries are in '$(idir)/lib'. Since this project is only for a
# single architecture, we can trick GCC into building its libraries
# in '$(idir)/lib' by defining the '$(idir)/lib64' as a symbolic
# link to '$(idir)/lib'.
if [ $(host_cc) = 1 ]; then \
$(call makelink,gcc); \
$(call makelink,g++,mandatory); \
$(call makelink,gfortran,mandatory); \
$(call makelink,strip,mandatory); \
ln -sf $$(which gcc) $(ibdir)/cc; \
ccinfo=$$(gcc --version | awk 'NR==1'); \
echo "C compiler (""$$ccinfo"")" > $@; \
else \
rm -f $(ibdir)/gcc* $(ibdir)/g++ $(ibdir)/gfortran $(ibdir)/gcov*;\
rm -rf $(ildir)/gcc $(ildir)/libcc* $(ildir)/libgcc*; \
rm -rf $(ildir)/libgfortran* $(ildir)/libstdc* rm $(idir)/x86_64*;\
\
ln -fs $(ildir) $(idir)/lib64; \
\
cd $(ddir); \
rm -rf gcc-build gcc-$(gcc-version); \
tar xf $< \
&& mkdir $(ddir)/gcc-build \
&& cd $(ddir)/gcc-build \
&& ../gcc-$(gcc-version)/configure SHELL=$(ibdir)/bash \
--prefix=$(idir) \
--with-mpc=$(idir) \
--with-mpfr=$(idir) \
--with-gmp=$(idir) \
--with-isl=$(idir) \
--with-build-time-tools=$(idir) \
--enable-shared \
--disable-multilib \
--disable-multiarch \
--enable-threads=posix \
--with-local-prefix=$(idir) \
--enable-languages=c,c++,fortran,objc,obj-c++ \
--disable-libada \
--disable-nls \
--enable-default-pie \
--enable-default-ssp \
--enable-cet=auto \
--enable-decimal-float \
&& make SHELL=$(ibdir)/bash -j$$(nproc) \
&& make SHELL=$(ibdir)/bash install \
&& cd .. \
&& rm -rf gcc-build gcc-$(gcc-version) \
\
&& if [ "x$(on_mac_os)" != xyes ]; then \
for f in $$(find $(idir)/libexec/gcc); do \
if ldd $$f &> /dev/null; then \
patchelf --set-rpath $(ildir) $$f; \
fi; \
done; \
fi; \
ln -sf $(ibdir)/gcc $(ibdir)/cc \
&& echo "GNU Compiler Collection (GCC) $(gcc-version)" > $@; \
fi
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