diff options
Diffstat (limited to 'tex')
| -rw-r--r-- | tex/dependencies/astropy.tex | 97 | ||||
| -rw-r--r-- | tex/dependencies/cython.tex | 21 | ||||
| -rw-r--r-- | tex/dependencies/fftw.tex | 19 | ||||
| -rw-r--r-- | tex/dependencies/gnuastro.tex | 24 | ||||
| -rw-r--r-- | tex/dependencies/matplotlib.tex | 22 | ||||
| -rw-r--r-- | tex/dependencies/mpi4py.tex | 20 | ||||
| -rw-r--r-- | tex/dependencies/numpy.tex | 23 | ||||
| -rw-r--r-- | tex/dependencies/scipy.tex | 34 | ||||
| -rw-r--r-- | tex/src/delete-me-demo.tex | 4 | ||||
| -rw-r--r-- | tex/src/delete-me.tex | 2 | ||||
| -rw-r--r-- | tex/src/preamble-biblatex.tex | 2 | ||||
| -rw-r--r-- | tex/src/preamble-necessary.tex | 2 |
12 files changed, 5 insertions, 265 deletions
diff --git a/tex/dependencies/astropy.tex b/tex/dependencies/astropy.tex deleted file mode 100644 index 450212d..0000000 --- a/tex/dependencies/astropy.tex +++ /dev/null @@ -1,97 +0,0 @@ -%% Copyright (C) 2019 Mohammad Akhlaghi <mohammad@akhlaghi.org> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{astropy2018, - author = {{Astropy Collaboration} and {Price-Whelan}, A.~M. and {Sip{\H o}cz}, B.~M. and - {G{\"u}nther}, H.~M. and {Lim}, P.~L. and {Crawford}, S.~M. and - {Conseil}, S. and {Shupe}, D.~L. and {Craig}, M.~W. and {Dencheva}, N. and - {Ginsburg}, A. and {VanderPlas}, J.~T. and {Bradley}, L.~D. and - {P{\'e}rez-Su{\'a}rez}, D. and {de Val-Borro}, M. and {Aldcroft}, T.~L. and - {Cruz}, K.~L. and {Robitaille}, T.~P. and {Tollerud}, E.~J. and - {Ardelean}, C. and {Babej}, T. and {Bach}, Y.~P. and {Bachetti}, M. and - {Bakanov}, A.~V. and {Bamford}, S.~P. and {Barentsen}, G. and - {Barmby}, P. and {Baumbach}, A. and {Berry}, K.~L. and {Biscani}, F. and - {Boquien}, M. and {Bostroem}, K.~A. and {Bouma}, L.~G. and {Brammer}, G.~B. and - {Bray}, E.~M. and {Breytenbach}, H. and {Buddelmeijer}, H. and - {Burke}, D.~J. and {Calderone}, G. and {Cano Rodr{\'{\i}}guez}, J.~L. and - {Cara}, M. and {Cardoso}, J.~V.~M. and {Cheedella}, S. and {Copin}, Y. and - {Corrales}, L. and {Crichton}, D. and {D'Avella}, D. and {Deil}, C. and - {Depagne}, {\'E}. and {Dietrich}, J.~P. and {Donath}, A. and - {Droettboom}, M. and {Earl}, N. and {Erben}, T. and {Fabbro}, S. and - {Ferreira}, L.~A. and {Finethy}, T. and {Fox}, R.~T. and {Garrison}, L.~H. and - {Gibbons}, S.~L.~J. and {Goldstein}, D.~A. and {Gommers}, R. and - {Greco}, J.~P. and {Greenfield}, P. and {Groener}, A.~M. and - {Grollier}, F. and {Hagen}, A. and {Hirst}, P. and {Homeier}, D. and - {Horton}, A.~J. and {Hosseinzadeh}, G. and {Hu}, L. and {Hunkeler}, J.~S. and - {Ivezi{\'c}}, {\v Z}. and {Jain}, A. and {Jenness}, T. and {Kanarek}, G. and - {Kendrew}, S. and {Kern}, N.~S. and {Kerzendorf}, W.~E. and - {Khvalko}, A. and {King}, J. and {Kirkby}, D. and {Kulkarni}, A.~M. and - {Kumar}, A. and {Lee}, A. and {Lenz}, D. and {Littlefair}, S.~P. and - {Ma}, Z. and {Macleod}, D.~M. and {Mastropietro}, M. and {McCully}, C. and - {Montagnac}, S. and {Morris}, B.~M. and {Mueller}, M. and {Mumford}, S.~J. and - {Muna}, D. and {Murphy}, N.~A. and {Nelson}, S. and {Nguyen}, G.~H. and - {Ninan}, J.~P. and {N{\"o}the}, M. and {Ogaz}, S. and {Oh}, S. and - {Parejko}, J.~K. and {Parley}, N. and {Pascual}, S. and {Patil}, R. and - {Patil}, A.~A. and {Plunkett}, A.~L. and {Prochaska}, J.~X. and - {Rastogi}, T. and {Reddy Janga}, V. and {Sabater}, J. and {Sakurikar}, P. and - {Seifert}, M. and {Sherbert}, L.~E. and {Sherwood-Taylor}, H. and - {Shih}, A.~Y. and {Sick}, J. and {Silbiger}, M.~T. and {Singanamalla}, S. and - {Singer}, L.~P. and {Sladen}, P.~H. and {Sooley}, K.~A. and - {Sornarajah}, S. and {Streicher}, O. and {Teuben}, P. and {Thomas}, S.~W. and - {Tremblay}, G.~R. and {Turner}, J.~E.~H. and {Terr{\'o}n}, V. and - {van Kerkwijk}, M.~H. and {de la Vega}, A. and {Watkins}, L.~L. and - {Weaver}, B.~A. and {Whitmore}, J.~B. and {Woillez}, J. and - {Zabalza}, V. and {Astropy Contributors}}, - title = "{The Astropy Project: Building an Open-science Project and Status of the v2.0 Core Package}", - journal = {AJ}, -archivePrefix = "arXiv", - eprint = {1801.02634}, - primaryClass = "astro-ph.IM", - keywords = {methods: data analysis, methods: miscellaneous, methods: statistical, reference systems }, - year = 2018, - month = sep, - volume = 156, - eid = {123}, - pages = {123}, - doi = {10.3847/1538-3881/aabc4f}, - adsurl = {http://adsabs.harvard.edu/abs/2018AJ....156..123A}, - adsnote = {Provided by the SAO/NASA Astrophysics Data System} -} - - - - - -@ARTICLE{astropy2013, - author = {{Astropy Collaboration} and {Robitaille}, T.~P. and {Tollerud}, E.~J. and - {Greenfield}, P. and {Droettboom}, M. and {Bray}, E. and {Aldcroft}, T. and - {Davis}, M. and {Ginsburg}, A. and {Price-Whelan}, A.~M. and - {Kerzendorf}, W.~E. and {Conley}, A. and {Crighton}, N. and - {Barbary}, K. and {Muna}, D. and {Ferguson}, H. and {Grollier}, F. and - {Parikh}, M.~M. and {Nair}, P.~H. and {Unther}, H.~M. and {Deil}, C. and - {Woillez}, J. and {Conseil}, S. and {Kramer}, R. and {Turner}, J.~E.~H. and - {Singer}, L. and {Fox}, R. and {Weaver}, B.~A. and {Zabalza}, V. and - {Edwards}, Z.~I. and {Azalee Bostroem}, K. and {Burke}, D.~J. and - {Casey}, A.~R. and {Crawford}, S.~M. and {Dencheva}, N. and - {Ely}, J. and {Jenness}, T. and {Labrie}, K. and {Lim}, P.~L. and - {Pierfederici}, F. and {Pontzen}, A. and {Ptak}, A. and {Refsdal}, B. and - {Servillat}, M. and {Streicher}, O.}, - title = "{Astropy: A community Python package for astronomy}", - journal = {A\&A}, -archivePrefix = "arXiv", - eprint = {1307.6212}, - primaryClass = "astro-ph.IM", - keywords = {methods: data analysis, methods: miscellaneous, virtual observatory tools}, - year = 2013, - month = oct, - volume = 558, - eid = {A33}, - pages = {A33}, - doi = {10.1051/0004-6361/201322068}, - adsurl = {http://adsabs.harvard.edu/abs/2013A\%26A...558A..33A}, - adsnote = {Provided by the SAO/NASA Astrophysics Data System} -} diff --git a/tex/dependencies/cython.tex b/tex/dependencies/cython.tex deleted file mode 100644 index 110cb19..0000000 --- a/tex/dependencies/cython.tex +++ /dev/null @@ -1,21 +0,0 @@ -%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{cython2011, - author = {{Behnel}, S. and {Bradshaw}, R. and {Citro}, C. and {Dalcin}, L. and - {Seljebotn}, D.~S. and {Smith}, K.}, - title = "{Cython: The Best of Both Worlds}", - journal = {CiSE}, - year = 2011, - month = mar, - volume = 13, - number = 2, - pages = {31}, - doi = {10.1109/MCSE.2010.118}, - adsurl = {http://adsabs.harvard.edu/abs/2011CSE....13b..31B}, - adsnote = {Provided by the SAO/NASA Astrophysics Data System} -} diff --git a/tex/dependencies/fftw.tex b/tex/dependencies/fftw.tex deleted file mode 100644 index 60c24a8..0000000 --- a/tex/dependencies/fftw.tex +++ /dev/null @@ -1,19 +0,0 @@ -%% Copyright (C) 2019 Mohammad Akhlaghi <mohammad@akhlaghi.org> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{fftw, - author = {M. {Frigo} and S. G. {Johnson}}, - journal = {IEEE Proc.}, - title = {The Design and Implementation of FFTW3}, - year = {2005}, - volume = {93}, - number = {2}, - pages = {216}, - doi = {10.1109/JPROC.2004.840301}, - ISSN = {0018-9219}, - month = {Feb}, -} diff --git a/tex/dependencies/gnuastro.tex b/tex/dependencies/gnuastro.tex deleted file mode 100644 index 91788c9..0000000 --- a/tex/dependencies/gnuastro.tex +++ /dev/null @@ -1,24 +0,0 @@ -%% Copyright (C) 2019 Mohammad Akhlaghi <mohammad@akhlaghi.org> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{gnuastro, - author = {{Akhlaghi}, M. and {Ichikawa}, T.}, - title = "{Noise-based Detection and Segmentation of Nebulous Objects}", - journal = {ApJS}, -archivePrefix = "arXiv", - eprint = {1505.01664}, - primaryClass = "astro-ph.IM", - keywords = {galaxies: irregular, galaxies: photometry, galaxies: structure, methods: data analysis, techniques: image processing, techniques: photometric}, - year = 2015, - month = sep, - volume = 220, - eid = {1}, - pages = {1}, - doi = {10.1088/0067-0049/220/1/1}, - adsurl = {http://adsabs.harvard.edu/abs/2015ApJS..220....1A}, - adsnote = {Provided by the SAO/NASA Astrophysics Data System} -} diff --git a/tex/dependencies/matplotlib.tex b/tex/dependencies/matplotlib.tex deleted file mode 100644 index 8578899..0000000 --- a/tex/dependencies/matplotlib.tex +++ /dev/null @@ -1,22 +0,0 @@ -%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@Article{matplotlib2007, - Author = {Hunter, J. D.}, - Title = {Matplotlib: A 2D graphics environment}, - Journal = {CiSE}, - Volume = {9}, - Number = {3}, - Pages = {90}, - abstract = {Matplotlib is a 2D graphics package used for Python - for application development, interactive scripting, and - publication-quality image generation across user - interfaces and operating systems.}, - publisher = {IEEE COMPUTER SOC}, - doi = {10.1109/MCSE.2007.55}, - year = 2007 -} diff --git a/tex/dependencies/mpi4py.tex b/tex/dependencies/mpi4py.tex deleted file mode 100644 index 4e0045f..0000000 --- a/tex/dependencies/mpi4py.tex +++ /dev/null @@ -1,20 +0,0 @@ -%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{mpi4py2011, - author = {{Dalcin}, L.~D. and {Paz}, R.~R. and {Kler}, P.~A. and {Cosimo}, A. - }, - title = "{Parallel distributed computing using Python}", - journal = {Advances in Water Resources}, - year = 2011, - month = sep, - volume = 34, - pages = {1124}, - doi = {10.1016/j.advwatres.2011.04.013}, - adsurl = {http://adsabs.harvard.edu/abs/2011AdWR...34.1124D}, - adsnote = {Provided by the SAO/NASA Astrophysics Data System} -} diff --git a/tex/dependencies/numpy.tex b/tex/dependencies/numpy.tex deleted file mode 100644 index 0d9028f..0000000 --- a/tex/dependencies/numpy.tex +++ /dev/null @@ -1,23 +0,0 @@ -%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{numpy2011, - author = {{van der Walt}, S. and {Colbert}, S.~C. and {Varoquaux}, G.}, - title = "{The NumPy Array: A Structure for Efficient Numerical Computation}", - journal = {CiSE}, -archivePrefix = "arXiv", - eprint = {1102.1523}, - primaryClass = "cs.MS", - year = 2011, - month = mar, - volume = 13, - number = 2, - pages = {22}, - doi = {10.1109/MCSE.2011.37}, - adsurl = {http://adsabs.harvard.edu/abs/2011CSE....13b..22V}, - adsnote = {Provided by the SAO/NASA Astrophysics Data System} -} diff --git a/tex/dependencies/scipy.tex b/tex/dependencies/scipy.tex deleted file mode 100644 index 60500d2..0000000 --- a/tex/dependencies/scipy.tex +++ /dev/null @@ -1,34 +0,0 @@ -%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com> -%% -%% Copying and distribution of this file, with or without modification, -%% are permitted in any medium without royalty provided the copyright -%% notice and this notice are preserved. This file is offered as-is, -%% without any warranty. - -@ARTICLE{scipy2011, - author = {K. J. {Millman} and M. {Aivazis}}, - journal = {CiSE}, - title = {Python for Scientists and Engineers}, - year = {2011}, - volume = {13}, - number = {2}, - pages = {9}, - keywords = {Special issues and sections;Computer languages;Programming;Scientific computing;Numerical models;Programming languages;Python;Scientific computing;interactive research;Python libraries;Python tools}, - doi = {10.1109/MCSE.2011.36}, - ISSN = {1521-9615}, - month ={March}, -} - -@ARTICLE{scipy2007, - author = {T. E. {Oliphant}}, - journal = {CiSE}, - title = {Python for Scientific Computing}, - year = {2007}, - volume = {9}, - number = {3}, - pages = {10}, - keywords = {high level languages;Python;scientific computing;steering language;scientific codes;high-level language;Scientific computing;High level languages;Libraries;Writing;Application software;Embedded software;Software standards;Standards development;Internet;Prototypes;Python;computer languages;scientific programming;scientific computing}, - doi = {10.1109/MCSE.2007.58}, - ISSN = {1521-9615}, - month = {May}, -} diff --git a/tex/src/delete-me-demo.tex b/tex/src/delete-me-demo.tex index abd45f6..67024bb 100644 --- a/tex/src/delete-me-demo.tex +++ b/tex/src/delete-me-demo.tex @@ -20,7 +20,7 @@ %% The displayed WFPC2 image. \node[anchor=south west] (img) at (0,0) {\includegraphics[width=0.5\linewidth] - {tex/pipeline/delete-me-demo/wfpc2.pdf}}; + {tex/build/delete-me-demo/wfpc2.pdf}}; %% Its label \node[anchor=south west] at (0.45\linewidth,0.45\linewidth) @@ -42,7 +42,7 @@ ] \addplot [const plot mark mid, fill=red] table [x index=0, y index=1] - {tex/pipeline/delete-me-demo/wfpc2-hist.txt} + {tex/build/delete-me-demo/wfpc2-hist.txt} \closedcycle; \end{axis} diff --git a/tex/src/delete-me.tex b/tex/src/delete-me.tex index 12fd3b7..552e92a 100644 --- a/tex/src/delete-me.tex +++ b/tex/src/delete-me.tex @@ -26,7 +26,7 @@ %% A particular plot. \addplot+[scatter, only marks] - table {tex/pipeline/delete-me/data.txt}; + table {tex/build/delete-me/data.txt}; \end{axis} \end{tikzpicture} diff --git a/tex/src/preamble-biblatex.tex b/tex/src/preamble-biblatex.tex index b4c02f9..ca54f90 100644 --- a/tex/src/preamble-biblatex.tex +++ b/tex/src/preamble-biblatex.tex @@ -56,7 +56,7 @@ \DeclareFieldFormat[article]{pages}{#1} \DeclareFieldFormat{pages}{\mkfirstpage[{\mkpageprefix[bookpagination]}]{#1}} \addbibresource{tex/src/references.tex} -\addbibresource{tex/pipeline/macros/dependencies-bib.tex} +\addbibresource{tex/build/macros/dependencies-bib.tex} \renewbibmacro{in:}{} \renewcommand*{\bibfont}{\footnotesize} \DefineBibliographyStrings{english}{references = {References}} diff --git a/tex/src/preamble-necessary.tex b/tex/src/preamble-necessary.tex index 2abcb9e..1deb8ec 100644 --- a/tex/src/preamble-necessary.tex +++ b/tex/src/preamble-necessary.tex @@ -24,7 +24,7 @@ %% Values from the analysis. -\input{tex/pipeline/macros/pipeline.tex} +\input{tex/build/macros/project.tex} |