diff options
Diffstat (limited to 'reproduce')
| -rw-r--r-- | reproduce/config/gnuastro/gnuastro.conf | 10 | ||||
| -rw-r--r-- | reproduce/config/pipeline/LOCAL.mk.in | 20 | ||||
| -rw-r--r-- | reproduce/src/make/initialize.mk | 4 |
3 files changed, 28 insertions, 6 deletions
diff --git a/reproduce/config/gnuastro/gnuastro.conf b/reproduce/config/gnuastro/gnuastro.conf index 49f9906..a2a44cf 100644 --- a/reproduce/config/gnuastro/gnuastro.conf +++ b/reproduce/config/gnuastro/gnuastro.conf @@ -12,9 +12,10 @@ # pipeline is taken from the default Gnuastro configuration from its # source (`bin/gnuastro.conf'). -# Reproduction pipeline +# Reproduction pipeline (`./config' has to be before `lastconfig'). + config .gnuastro/gnuastro-local.conf + # onlyversion X.X lastconfig 1 -# onlyversion X.X # Input: hdu 1 @@ -30,7 +31,4 @@ interponlyblank 0 # Output: - tableformat fits-binary - -# Operating mode - minmapsize 1000000000
\ No newline at end of file + tableformat fits-binary
\ No newline at end of file diff --git a/reproduce/config/pipeline/LOCAL.mk.in b/reproduce/config/pipeline/LOCAL.mk.in index 896df2f..ac8e10e 100644 --- a/reproduce/config/pipeline/LOCAL.mk.in +++ b/reproduce/config/pipeline/LOCAL.mk.in @@ -48,3 +48,23 @@ SURVEY = reproduce/SURVEY # more easy: the contents of the build directory do not need to be backed # up since they can be reproduced and they can be large. BDIR = reproduce/BDIR + + + + + +# Memory mapping minimum size +# --------------------------- +# +# Some programs (for example Gnuastro) can deal with cases where the local +# system doesn't have enough memory (RAM) to keep large files there. For +# example, they will create memory-mapped (`mmap' for short) files on the +# HDD or SSD and read/write to them instead of RAM. This will ofcourse, +# slow down the processing, but atleast the program won't crash. +# +# Since the memory requirements of different systems are different and it +# has no effect on the software's final result, the minimum size of an +# allocated array to warrant a mapping to HDD/SSD instead of RAM must also +# be defined here. This value will be used in the programs that support +# this feature. +MINMAPSIZE = 1000000000 diff --git a/reproduce/src/make/initialize.mk b/reproduce/src/make/initialize.mk index 3125399..7854c2f 100644 --- a/reproduce/src/make/initialize.mk +++ b/reproduce/src/make/initialize.mk @@ -129,7 +129,9 @@ reproduce/build: | $(BDIR) # want it to be rebuilt every time. .PHONY: all clean distclean clean-mmap $(mtexdir)/initialize.tex distclean: clean; rm -f $(pconfdir)/LOCAL.mk +# --------- Delete for no Gnuastro --------- clean-mmap:; rm -f reproduce/config/gnuastro/mmap* +# ------------------------------------------ clean: clean-mmap ifeq ($(configure-run),yes) rm -rf $(BDIR) @@ -153,9 +155,11 @@ $(mtexdir)/initialize.tex: | $(mtexdir) @v=$$(git describe --dirty --always); \ echo "\newcommand{\pipelineversion}{$$v}" > $@ +# --------- Delete for no Gnuastro --------- # Version of Gnuastro. @v=$$(astnoisechisel --version | awk 'NR==1{print $$NF}'); \ echo "\newcommand{\gnuastroversion}{$$v}" >> $@ +# ------------------------------------------ # Location of the build directory (for LaTeX inputs). @echo "\newcommand{\bdir}{$(BDIR)}" >> $@ |