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-rw-r--r--.file-metadatabin3843 -> 4010 bytes
-rwxr-xr-xreproduce/src/bash/download-multi-try.sh108
-rw-r--r--reproduce/src/make/download.mk4
3 files changed, 110 insertions, 2 deletions
diff --git a/.file-metadata b/.file-metadata
index fe72296..e1cbf37 100644
--- a/.file-metadata
+++ b/.file-metadata
Binary files differ
diff --git a/reproduce/src/bash/download-multi-try.sh b/reproduce/src/bash/download-multi-try.sh
new file mode 100755
index 0000000..31490c9
--- /dev/null
+++ b/reproduce/src/bash/download-multi-try.sh
@@ -0,0 +1,108 @@
+#!.local/bin/bash
+#
+# Try downloading multiple times before crashing whole pipeline
+#
+# $ ./download-multi-try downloader lockfile input-url downloaded-name
+#
+# Due to temporary network problems, a download may fail suddenly, but
+# succeed in a second try a few seconds later. Without this script that
+# temporary glitch in the network will permanently crash the pipeline and
+# it can't continue. The job of this script is to be patient and try the
+# download multiple times before crashing the whole pipeline.
+#
+# LOCK FILE: Since there is ultimately only one network port to the outside
+# world, downloading is done much faster in serial, not in parallel. But
+# the pipeline's processing may be done in parallel (with multiple threads
+# needing to download different files at the same time). Therefore, this
+# script uses the `flock' program to only do one download at a time. To
+# benefit from it, any call to this script must be given the same lock
+# file.
+#
+# Original author:
+# Mohammad Akhlaghi <mohammad@akhlaghi.org>
+# Contributing author(s):
+# Copyright (C) 2019, Mohammad Akhlaghi.
+#
+# This script is free software: you can redistribute it and/or modify it
+# under the terms of the GNU General Public License as published by the
+# Free Software Foundation, either version 3 of the License, or (at your
+# option) any later version.
+#
+# This script is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
+# Public License for more details. See <http://www.gnu.org/licenses/>.
+
+
+
+
+
+# Script settings
+# ---------------
+# Stop the script if there are any errors.
+set -e
+
+
+
+
+
+# Input arguments and necessary sanity checks.
+inurl="$3"
+outname="$4"
+lockfile="$2"
+downloader="$1"
+if [ "x$downloader" = x ]; then
+ echo "$0: downloader (first argument) not given."; exit 1;
+fi
+if [ "x$lockfile" = x ]; then
+ echo "$0: lock file (second argument) not given."; exit 1;
+fi
+if [ "x$inurl" = x ]; then
+ echo "$0: full input URL (third argument) not given."; exit 1;
+fi
+if [ "x$outname" = x ]; then
+ echo "$0: output name (fourth argument) not given."; exit 1;
+fi
+
+
+
+
+
+# Try downloading multiple times before crashing
+counter=0
+maxcounter=10
+while [ ! -f "$outname" ]; do
+
+ # Increment the counter. We need the `counter=' part here because
+ # without it the evaluation of arithmetic expression will be like and
+ # error and the script is set to crash on errors.
+ counter=$((counter+1))
+
+ # If we have passed a maximum number of trials, just exit with
+ # a failed code.
+ if (( counter > maxcounter )); then
+ echo
+ echo "Failed $maxcounter download attempts: $outname"
+ echo
+ exit 1
+ fi
+
+ # If this isn't the first attempt print a notice and wait a little for
+ # the next trail.
+ if (( counter > 1 )); then
+ tstep=$((counter*5))
+ echo "Download trial $counter for '$outname' in $tstep seconds."
+ sleep $tstep
+ fi
+
+ # Attempt downloading the file (one-at-a-time).
+ flock "$lockfile" bash -c \
+ "if ! $downloader -O$outname $inurl; then rm -f $outname; fi"
+done
+
+
+
+
+
+# Return successfully
+exit 0
diff --git a/reproduce/src/make/download.mk b/reproduce/src/make/download.mk
index f83ad6f..1fc51e6 100644
--- a/reproduce/src/make/download.mk
+++ b/reproduce/src/make/download.mk
@@ -52,6 +52,7 @@
# process with a file and make sure that only one downloading event is in
# progress at every moment.
$(indir):; mkdir $@
+downloadwrapper = $(srcdir)/bash/download-multi-try.sh
inputdatasets = $(foreach i, wfpc2, $(indir)/$(i).fits)
$(inputdatasets): $(indir)/%.fits: | $(indir) $(lockdir)
@@ -68,8 +69,7 @@ $(inputdatasets): $(indir)/%.fits: | $(indir) $(lockdir)
ln -s $(INDIR)/$$origname $@
else
touch $(lockdir)/download
- flock $(lockdir)/download bash -c \
- "if ! wget -O$@ $$url/$$origname; then rm -f $@; exit 1; fi"
+ $(downloadwrapper) wget $(lockdir)/download $$url/$$origname $@
fi
# Check the md5 sum to see if this is the proper dataset.