Gnuastro's analysis configuration files removed

Until now, the core Maneage branch included some configuration files for
Gnuastro's programs. This was actually a remnant of the distant past when
Maneage didn't actually build its own software and we had to rely on the
host's software versions. This file contained the configuration files
specific to Gnuastro for this project and also had a feature to avoid
checking the host's own configuration files.

However, we now build all our software ourselves with fixed configuration
files (for the version that is being installed and its version is
stored). So those extra configuration files were just extra and caused
confusion and problems in some scenarios. With this commit, those extra
files are now removed.

Also, two small issues are also addressed in parallel with this commit:

 - When running './project make clean', the 'hardware-parameters.tex' macro
   file (which is created by './project configure' is not deleted.

 - The project title is now written into the default output's PDF's
   properties (through 'hypersetup' in 'tex/src/preamble-header.tex')
   through the LaTeX macro.

All these issues were found and fixed with the help of Samane Raji.

6 files changed, 2 insertions, 134 deletions

diff --git a/reproduce/analysis/config/gnuastro/astbuildprog.conf b/reproduce/analysis/config/gnuastro/astbuildprog.conf
deleted file mode 100644
index 7adb4d1..0000000
--- a/reproduce/analysis/config/gnuastro/astbuildprog.conf
+++ /dev/null
@@ -1,16 +0,0 @@
-# BuildProgram's configuration file depends on the build and is installed
-# along with the rest of Gnuastro. So we'll set any specific configuration
-# we want here, then import those.
-#
-# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved.  This file is offered as-is, without any
-# warranty.
-
-# To keep the program's compiled excutable file, comment this line.
-deletecompiled 1
-
-# Import the built configuration file
-config .local/etc/astbuildprog.conf
\ No newline at end of file
diff --git a/reproduce/analysis/config/gnuastro/astconvertt.conf b/reproduce/analysis/config/gnuastro/astconvertt.conf
deleted file mode 100644
index 770ac39..0000000
--- a/reproduce/analysis/config/gnuastro/astconvertt.conf
+++ /dev/null
@@ -1,33 +0,0 @@
-# Default parameters (System) for ConvertType.
-# ConvertType is part of GNU Astronomy Utitlies.
-#
-# Use the long option name of each parameter followed by a value. The name
-# and value should be separated by atleast one white-space character (for
-# example ` '[space], or tab). Lines starting with `#' are ignored.
-#
-# For more information, please run these commands:
-#
-#  $ astconvertt --help                  # Full list of options, short doc.
-#  $ astconvertt -P                      # Print all options and used values.
-#  $ info astconvertt                    # All options and input/output.
-#  $ info gnuastro "Configuration files" # How to use configuration files.
-#
-# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved.  This file is offered as-is, without any
-# warranty.
-
-# Input:
-
-# Output:
- quality              100
- widthincm            10.0
- borderwidth          1
- output               jpg
-
-# Flux:
- invert               0
-
-# Common options
diff --git a/reproduce/analysis/config/gnuastro/aststatistics.conf b/reproduce/analysis/config/gnuastro/aststatistics.conf
deleted file mode 100644
index 90f985d..0000000
--- a/reproduce/analysis/config/gnuastro/aststatistics.conf
+++ /dev/null
@@ -1,36 +0,0 @@
-# Default parameters (System) for Statistics.
-# Statistics is part of GNU Astronomy Utitlies.
-#
-# Use the long option name of each parameter followed by a value. The name
-# and value should be separated by atleast one white-space character (for
-# example ` '[space], or tab). Lines starting with `#' are ignored.
-#
-# For more information, please run these commands:
-#
-#  $ aststatistics --help                # Full list of options, short doc.
-#  $ aststatistics -P                    # Print all options and used values.
-#  $ info aststatistics                  # All options and input/output.
-#  $ info gnuastro "Configuration files" # How to use configuration files.
-#
-# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved.  This file is offered as-is, without any
-# warranty.
-
-# Input image:
-
-# Sky and its STD settings
- khdu                 1
- meanmedqdiff     0.005
- outliersigma        10
- outliersclip     3,0.2
- smoothwidth          3
- sclipparams      3,0.1
-
-# Histogram and CFP settings
- numasciibins        70
- asciiheight         10
- numbins            100
- mirrordist         1.5
diff --git a/reproduce/analysis/config/gnuastro/gnuastro.conf b/reproduce/analysis/config/gnuastro/gnuastro.conf
deleted file mode 100644
index 82cb100..0000000
--- a/reproduce/analysis/config/gnuastro/gnuastro.conf
+++ /dev/null
@@ -1,43 +0,0 @@
-# Default values for the common options to all the programs in GNU
-# Astronomy Utitlies.
-#
-# IMPORTANT NOTE: The `lastconfig' option is very important in a
-# reproducible environment. Because we don't want any of Gnuastro's
-# programs to go into an un-controlled environment (user or system wide
-# configuration files).
-#
-# The rest of this configuration file is taken from the default Gnuastro
-# configuration from its source (`bin/gnuastro.conf').
-#
-# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved.  This file is offered as-is, without any
-# warranty.
-
-# Local project settings (`config' has to be before `lastconfig').
- config           .gnuastro/gnuastro-local.conf
- lastconfig       1
-
-# Input:
- hdu              1
- ignorecase       1
- searchin         name
- stdintimeout     100000
-
-# Tessellation
- tilesize         30,30
- numchannels      1,1
- remainderfrac    0.1
- workoverch       0
- interpmetric     radial
- interpnumngb     9
- interponlyblank  0
-
-# Output:
- tableformat      fits-binary
-
-# Operating mode
- quietmmap        0
- minmapsize       2000000000
diff --git a/reproduce/analysis/make/initialize.mk b/reproduce/analysis/make/initialize.mk
index fca75f5..3a35ece 100644
--- a/reproduce/analysis/make/initialize.mk
+++ b/reproduce/analysis/make/initialize.mk
@@ -38,9 +38,6 @@ mtexdir     = $(texdir)/macros
 bashdir     = reproduce/analysis/bash
 pconfdir    = reproduce/analysis/config
 installdir  = $(BDIR)/software/installed
-# --------- Delete for no Gnuastro ---------
-gconfdir    = reproduce/analysis/config/gnuastro
-# ------------------------------------------
 
 
 
@@ -239,7 +236,7 @@ clean: clean-mmap
         # features like ignoring the listing of a file with `!()' that we
         # are using afterwards.
 	shopt -s extglob
-	rm -rf $(BDIR)/tex/macros/!(dependencies.tex|dependencies-bib.tex)
+	rm -rf $(BDIR)/tex/macros/!(dependencies.tex|dependencies-bib.tex|hardware-parameters.tex)
 	rm -rf $(BDIR)/!(software|tex) $(BDIR)/tex/!(macros|$(texbtopdir))
 	rm -rf $(BDIR)/tex/build/!(tikz) $(BDIR)/tex/build/tikz/*
 	rm -rf $(BDIR)/software/preparation-done.mk
@@ -254,8 +251,8 @@ distclean: clean
         # `rm' program. So for this recipe, we'll use the host system's
         # `rm', not our own.
 	$$sys_rm -rf $(BDIR)
+	$$sys_rm -f $(pconfdir)/LOCAL.conf
 	$$sys_rm -f Makefile .gnuastro .local .build
-	$$sys_rm -f $(pconfdir)/LOCAL.conf $(gconfdir)/gnuastro-local.conf
 
 
 
diff --git a/reproduce/software/shell/configure.sh b/reproduce/software/shell/configure.sh
index 8a30f1a..646f101 100755
--- a/reproduce/software/shell/configure.sh
+++ b/reproduce/software/shell/configure.sh
@@ -1257,7 +1257,6 @@ ln -s "$tikzdir" tex/tikz
 
 # --------- Delete for no Gnuastro ---------
 rm -f .gnuastro
-ln -s "$topdir"/reproduce/analysis/config/gnuastro .gnuastro
 # ------------------------------------------