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| author | Raul Infante-Sainz <infantesainz@gmail.com> | 2019-03-21 15:39:06 +0000 |
|---|---|---|
| committer | Raul Infante-Sainz <infantesainz@gmail.com> | 2019-03-21 15:39:06 +0000 |
| commit | 3e583296cb8ed2784f6cb71b53cbe3be4931fa46 (patch) | |
| tree | c57b39056ffa8d1f96109e497cff698e1eeba91f /reproduce/config/pipeline | |
| parent | 75571a551f794223bea2995dc7775a49abd63654 (diff) | |
ATLAS and Scipy working on GNU/Linux
Numpy needs ATLAS as shared libraries. So we also need to build Python with
shared libraries. We also need to define site.cfg for numpy and scipy so we
define a master template:
`reproduce/config/pipeline/dependency-numpy-scipy.cfg'
Also `Openssl' did not have rpath so we added with this commit.
Diffstat (limited to 'reproduce/config/pipeline')
| -rw-r--r-- | reproduce/config/pipeline/dependency-numpy-scipy.cfg | 47 | ||||
| -rw-r--r-- | reproduce/config/pipeline/dependency-versions.mk | 2 |
2 files changed, 48 insertions, 1 deletions
diff --git a/reproduce/config/pipeline/dependency-numpy-scipy.cfg b/reproduce/config/pipeline/dependency-numpy-scipy.cfg new file mode 100644 index 0000000..55e93bc --- /dev/null +++ b/reproduce/config/pipeline/dependency-numpy-scipy.cfg @@ -0,0 +1,47 @@ +# THIS IS A COPY OF NUMPY'S site.cfg.example, CUSTOMIZED FOR THIS PIPELINE +# ------------------------------------------------------------------------ + +# This file provides configuration information about non-Python dependencies for +# numpy.distutils-using packages. Create a file like this called "site.cfg" next +# to your package's setup.py file and fill in the appropriate sections. Not all +# packages will use all sections so you should leave out sections that your +# package does not use. + +# IMPORTANT NOTE +# -------------- +# +# The `ALL' grouping does't apply to ATLAS!!!!! + + [ALL] + library_dirs = @LIBDIR@ + include_dirs = @INCDIR@ + +# Atlas +# ----- +# Atlas is an open source optimized implementation of the BLAS and Lapack +# routines. NumPy will try to build against Atlas by default when available in +# the system library dirs. To build numpy against a custom installation of +# Atlas you can add an explicit section such as the following. Here we assume +# that Atlas was configured with ``prefix=/opt/atlas``. +# + [atlas] + library_dirs = @LIBDIR@ + include_dirs = @INCDIR@ + +# FFT libraries +# ------------- +# There are two FFT libraries that we can configure here: FFTW (2 and 3) and djbfft. +# Note that these libraries are not used by numpy or scipy. +# +# http://fftw.org/ +# https://cr.yp.to/djbfft.html +# +# Given only this section, numpy.distutils will try to figure out which version +# of FFTW you are using. +#[fftw] +#libraries = fftw3 +# +# For djbfft, numpy.distutils will look for either djbfft.a or libdjbfft.a . +#[djbfft] +#include_dirs = /usr/local/djbfft/include +#library_dirs = /usr/local/djbfft/lib diff --git a/reproduce/config/pipeline/dependency-versions.mk b/reproduce/config/pipeline/dependency-versions.mk index 609d1cb..79ecdce 100644 --- a/reproduce/config/pipeline/dependency-versions.mk +++ b/reproduce/config/pipeline/dependency-versions.mk @@ -82,7 +82,7 @@ jeepney-version = 0.4 kiwisolver-version = 1.0.1 keyring-version = 18.0.0 matplotlib-version = 3.0.2 -numpy-version = 1.16.1 +numpy-version = 1.16.2 pip-version = 19.0.2 pycparser-version = 2.19 pyparsing-version = 2.3.1 |