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-rw-r--r--reproduce/config/pipeline/INPUTS.mk15
-rw-r--r--reproduce/config/pipeline/LOCAL.mk.in16
-rw-r--r--reproduce/config/pipeline/delete-me-num.mk2
-rw-r--r--reproduce/config/pipeline/dependency-numpy-scipy.cfg46
-rw-r--r--reproduce/config/pipeline/dependency-texlive.mk22
-rw-r--r--reproduce/config/pipeline/dependency-versions.mk123
-rw-r--r--reproduce/config/pipeline/pdf-build.mk21
-rw-r--r--reproduce/config/pipeline/texlive.conf35
8 files changed, 0 insertions, 280 deletions
diff --git a/reproduce/config/pipeline/INPUTS.mk b/reproduce/config/pipeline/INPUTS.mk
deleted file mode 100644
index eb38295..0000000
--- a/reproduce/config/pipeline/INPUTS.mk
+++ /dev/null
@@ -1,15 +0,0 @@
-# Input files necessary for this project.
-#
-# This file is read by the configure script and running Makefiles.
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-WFPC2IMAGE = WFPC2ASSNu5780205bx.fits
-WFPC2MD5 = a4791e42cd1045892f9c41f11b50bad8
-WFPC2SIZE = 62kb
-WFPC2URL = https://fits.gsfc.nasa.gov/samples
diff --git a/reproduce/config/pipeline/LOCAL.mk.in b/reproduce/config/pipeline/LOCAL.mk.in
deleted file mode 100644
index 785bb6a..0000000
--- a/reproduce/config/pipeline/LOCAL.mk.in
+++ /dev/null
@@ -1,16 +0,0 @@
-# Local project configuration.
-#
-# This is just a template for the `./configure' script to fill in. Please
-# don't make any change to this file.
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved. This file is offered as-is, without any
-# warranty.
-BDIR = @bdir@
-INDIR = @indir@
-DEPENDENCIES-DIR = @ddir@
-DOWNLOADER = @downloader@
-GROUP-NAME = @groupname@
diff --git a/reproduce/config/pipeline/delete-me-num.mk b/reproduce/config/pipeline/delete-me-num.mk
deleted file mode 100644
index 17f608c..0000000
--- a/reproduce/config/pipeline/delete-me-num.mk
+++ /dev/null
@@ -1,2 +0,0 @@
-# Number of samples to create
-delete-me-num = 50
diff --git a/reproduce/config/pipeline/dependency-numpy-scipy.cfg b/reproduce/config/pipeline/dependency-numpy-scipy.cfg
deleted file mode 100644
index 4b7a7b0..0000000
--- a/reproduce/config/pipeline/dependency-numpy-scipy.cfg
+++ /dev/null
@@ -1,46 +0,0 @@
-# THIS IS A COPY OF NUMPY'S site.cfg.example, CUSTOMIZED FOR THIS TEMPLATE
-# ------------------------------------------------------------------------
-
-# This file provides configuration information about non-Python
-# dependencies for numpy.distutils-using packages. Create a file like this
-# called "site.cfg" next to your package's setup.py file and fill in the
-# appropriate sections. Not all packages will use all sections so you
-# should leave out sections that your package does not use.
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-# IMPORTANT NOTE
-# --------------
-#
-# The `ALL' grouping does't apply to ATLAS!!!!!
-
- [ALL]
- library_dirs = @LIBDIR@
- include_dirs = @INCDIR@
-
-
-# FFT libraries
-# -------------
-# There are two FFT libraries that we can configure here: FFTW (2 and 3) and djbfft.
-# Note that these libraries are not used by numpy or scipy.
-#
-# http://fftw.org/
-# https://cr.yp.to/djbfft.html
-#
-# Given only this section, numpy.distutils will try to figure out which version
-# of FFTW you are using.
-
-# Even with this section, Numpy apparently does not use fftw. But we will
-# keep it here for the future (if a solution is found).
-[fftw]
-libraries = fftw3
-#
-# For djbfft, numpy.distutils will look for either djbfft.a or libdjbfft.a .
-#[djbfft]
-#include_dirs = /usr/local/djbfft/include
-#library_dirs = /usr/local/djbfft/lib
diff --git a/reproduce/config/pipeline/dependency-texlive.mk b/reproduce/config/pipeline/dependency-texlive.mk
deleted file mode 100644
index 0acf5ab..0000000
--- a/reproduce/config/pipeline/dependency-texlive.mk
+++ /dev/null
@@ -1,22 +0,0 @@
-# Necessary packages to install in TeX Live.
-#
-# If any extra TeX package is necessary to build your paper, just add its
-# name to this variable (you can check in `ctan.org' to find the official
-# name).
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved. This file is offered as-is, without any
-# warranty.
-
-
-# Note on `tex' and `fancyhdr': These two packages are installed along with
-# the basic installation scheme that we used to install tlmgr, they will be
-# ignored in the `tlmgr install' command, but will be used later when we
-# want their versions.
-texlive-packages = tex fancyhdr ec newtx fontaxes xkeyval etoolbox xcolor \
- setspace caption footmisc datetime fmtcount titlesec \
- preprint ulem biblatex biber logreq pgf pgfplots fp \
- courier tex-gyre txfonts times
diff --git a/reproduce/config/pipeline/dependency-versions.mk b/reproduce/config/pipeline/dependency-versions.mk
deleted file mode 100644
index c6c8043..0000000
--- a/reproduce/config/pipeline/dependency-versions.mk
+++ /dev/null
@@ -1,123 +0,0 @@
-# Versions of the various dependencies
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-# Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com>
-#
-# This Makefile is free software: you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by the
-# Free Software Foundation, either version 3 of the License, or (at your
-# option) any later version.
-#
-# This Makefile is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
-# Public License for more details.
-#
-# A copy of the GNU General Public License is available at
-# <http://www.gnu.org/licenses/>.
-
-# C/C++ programs and libraries.
-atlas-version = 3.10.3
-bash-version = 5.0
-binutils-version = 2.31.1
-cfitsio-version = 3.45
-cmake-version = 3.12.4
-coreutils-version = 8.30
-curl-version = 7.63.0
-diffutils-version = 3.7
-fftw-version = 3.3.8
-file-version = 5.36
-findutils-version = 4.6.0.199-e3fc
-flock-version = 0.2.3
-freetype-version = 2.9
-gawk-version = 4.2.1
-gcc-version = 8.3.0
-ghostscript-version = 9.26
-git-version = 2.20.1
-gmp-version = 6.1.2
-gnuastro-version = 0.8
-grep-version = 3.3
-gsl-version = 2.5
-gzip-version = 1.10
-hdf5-version = 1.10.5
-isl-version = 0.18
-libbsd-version = 0.9.1
-libffi-version = 3.2.1
-libjpeg-version = v9b
-libpng-version = 1.6.36
-libtiff-version = 4.0.10
-libtool-version = 2.4.6
-lzip-version = 1.20
-m4-version = 1.4.18
-make-version = 4.2.90
-metastore-version = 1.1.2-23-fa9170b
-mpfr-version = 4.0.2
-mpc-version = 1.1.0
-ncurses-version = 6.1
-openblas-version = 0.3.5
-openmpi-version = 4.0.1
-openssl-version = 1.1.1a
-patchelf-version = 0.9
-pkgconfig-version = 0.29.2
-python-version = 3.6.8
-readline-version = 8.0
-sed-version = 4.7
-tar-version = 1.31
-unzip-version = 6.0
-wget-version = 1.20.1
-which-version = 2.21
-xz-version = 5.2.4
-zip-version = 3.0
-zlib-version = 1.2.11
-
-# Special libraries
-# -----------------
-#
-# When updating the version of these libraries, please look into the build
-# rule first: In one way or another, the version string becomes necessary
-# during their build and must be accounted for.
-bzip2-version = 1.0.6
-lapack-version = 3.8.0
-libgit2-version = 0.26.0
-wcslib-version = 6.2
-
-# Python packages
-# ---------------
-#
-# IMPORTANT: Fix url in `reproduce/src/make/dependencies.mk'
-# if changing the version
-asn1crypto-version = 0.24.0
-astroquery-version = 0.3.9
-astropy-version = 3.1.1
-beautifulsoup4-version = 4.7.1
-certifi-version = 2018.11.29
-cffi-version = 1.12.2
-chardet-version = 3.0.4
-cryptography-version = 2.6.1
-cycler-version = 0.10.0
-cython-version = 0.29.6
-entrypoints-version = 0.3
-h5py-version = 2.9.0
-html5lib-version = 1.0.1
-idna-version = 2.8
-jeepney-version = 0.4
-kiwisolver-version = 1.0.1
-keyring-version = 18.0.0
-matplotlib-version = 3.0.2
-mpi4py-version = 3.0.1
-numpy-version = 1.16.2
-pip-version = 19.0.2
-pycparser-version = 2.19
-pyparsing-version = 2.3.1
-pypkgconfig-version = 1.5.1
-python-dateutil-version = 2.8.0
-requests-version = 2.21.0
-scipy-version = 1.2.1
-secretstorage-version = 3.1.1
-setuptools-version = 40.8.0
-setuptools_scm-version = 3.2.0
-six-version = 1.12.0
-soupsieve-version = 1.8
-urllib3-version = 1.24.1
-virtualenv-version = 16.4.0
-webencodings-version = 0.5.1
diff --git a/reproduce/config/pipeline/pdf-build.mk b/reproduce/config/pipeline/pdf-build.mk
deleted file mode 100644
index 3a86ff3..0000000
--- a/reproduce/config/pipeline/pdf-build.mk
+++ /dev/null
@@ -1,21 +0,0 @@
-# Make the final PDF?
-# -------------------
-#
-# During the project's early phases, it is usually not necessary to build
-# the PDF file (which makes a lot of output lines on the command-line and
-# can make it hard to find the commands and possible errors (and their
-# outputs). Also, in some cases, only the produced results may be of
-# interest and not the final PDF, so LaTeX (and its necessary packages) may
-# not be installed.
-#
-# If this variable is given any string, a PDF will be made with
-# LaTeX. Otherwise, a notice will just printed that for now, no PDF will be
-# created.
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved. This file is offered as-is, without any
-# warranty.
-pdf-build-final = yes
diff --git a/reproduce/config/pipeline/texlive.conf b/reproduce/config/pipeline/texlive.conf
deleted file mode 100644
index 53054e1..0000000
--- a/reproduce/config/pipeline/texlive.conf
+++ /dev/null
@@ -1,35 +0,0 @@
-# Basic profile for build. Values to set:
-#
-# installdir: Install directory
-#
-# Copyright (C) 2018-2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
-#
-# Copying and distribution of this file, with or without modification, are
-# permitted in any medium without royalty provided the copyright notice and
-# this notice are preserved. This file is offered as-is, without any
-# warranty.
-selected_scheme scheme-basic
-TEXDIR @installdir@/texlive/2018
-TEXMFCONFIG @installdir@/texlive2018/texmf-config
-TEXMFLOCAL @installdir@/texlive/texmf-local
-TEXMFSYSCONFIG @installdir@/texlive/2018/texmf-config
-TEXMFSYSVAR @installdir@/texlive/2018/texmf-var
-TEXMFVAR @installdir@/texlive2018/texmf-var
-instopt_adjustpath 0
-instopt_adjustrepo 1
-instopt_letter 0
-instopt_portable 0
-instopt_write18_restricted 1
-tlpdbopt_autobackup 1
-tlpdbopt_backupdir @installdir@/texlive/2018/backups
-tlpdbopt_create_formats 1
-tlpdbopt_desktop_integration 1
-tlpdbopt_file_assocs 1
-tlpdbopt_generate_updmap 0
-tlpdbopt_install_docfiles 1
-tlpdbopt_install_srcfiles 1
-tlpdbopt_post_code 1
-tlpdbopt_sys_bin @installdir@/bin
-tlpdbopt_sys_info @installdir@/share/info
-tlpdbopt_sys_man @installdir@/share/man
-tlpdbopt_w32_multi_user 1