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authorMohammad Akhlaghi <mohammad@akhlaghi.org>2020-02-16 03:31:26 +0000
committerMohammad Akhlaghi <mohammad@akhlaghi.org>2020-02-16 03:31:26 +0000
commit13cb65a2eab708b0bd4777601331b3e83e96beac (patch)
tree60c7c846592e698789522cf7d80c18cf404473e1 /reproduce/software/bash
parent241515c3dc6ef7f7ee6b0db22312e316196ecb89 (diff)
Menke+2020 data is now imported and ready for later steps in plain text
The main problems with this dataset was the names of the journals (which sometimes have single quotes or apostrophes in them that is really annoying for SED)! But ultimately, for the simple study we want to do here, the journal names are irrelevant, so in the end I just ignored the names. Later we can set an identifier for the journals if necessary. But now we have the basic information in a way that is usable in a plot to show in this paper.
Diffstat (limited to 'reproduce/software/bash')
-rwxr-xr-xreproduce/software/bash/configure.sh15
1 files changed, 7 insertions, 8 deletions
diff --git a/reproduce/software/bash/configure.sh b/reproduce/software/bash/configure.sh
index 08f2609..f7fa9c8 100755
--- a/reproduce/software/bash/configure.sh
+++ b/reproduce/software/bash/configure.sh
@@ -299,10 +299,10 @@ if [ x"$input_dir" = x ]; then
else
indir=$input_dir
fi
-wfpc2name=$(awk '!/^#/ && $1=="WFPC2IMAGE" {print $3}' $adir/INPUTS.mk)
-wfpc2md5=$(awk '!/^#/ && $1=="WFPC2MD5" {print $3}' $adir/INPUTS.mk)
-wfpc2size=$(awk '!/^#/ && $1=="WFPC2SIZE" {print $3}' $adir/INPUTS.mk)
-wfpc2url=$(awk '!/^#/ && $1=="WFPC2URL" {print $3}' $adir/INPUTS.mk)
+mk20name=$(awk '!/^#/ && $1=="MK20DATA" {print $3}' $adir/INPUTS.mk)
+mk20md5=$(awk '!/^#/ && $1=="MK20MD5" {print $3}' $adir/INPUTS.mk)
+mk20size=$(awk '!/^#/ && $1=="MK20SIZE" {print $3}' $adir/INPUTS.mk)
+mk20url=$(awk '!/^#/ && $1=="MK20URL" {print $3}' $adir/INPUTS.mk)
if [ $rewritepconfig = yes ] && [ x"$input_dir" = x ]; then
cat <<EOF
@@ -315,10 +315,9 @@ please specify the directory hosting them on this system. If you don't,
they will be downloaded automatically. Each file is shown with its total
volume and its 128-bit MD5 checksum in parenthesis.
- $wfpc2name ($wfpc2size, $wfpc2md5):
- A 100x100 Hubble Space Telescope WFPC II image used in the FITS
- standard webpage as a demonstration of this file format.
- URL: $wfpc2url/$wfpc2name
+ $mk20name ($mk20size, $mk20md5):
+ Supplementary dataset to http://dx.doi.org/10.1101/2020.01.15.908111
+ URL: $mk20url
NOTE I: This directory, or the datasets above, are optional. If it doesn't
exist, the files will be downloaded in the build directory and used.