# Versions of the various dependencies
#
# Copyright (C) 2018-2026 Mohammad Akhlaghi <mohammad@akhlaghi.org>
# Copyright (C) 2019-2026 Raul Infante-Sainz <infantesainz@gmail.com>
# Copyright (C) 2022-2026 Pedram Ashofteh Ardakani <pedramardakani@pm.me>
#
# Copying and distribution of this file, with or without modification, are
# permitted in any medium without royalty provided the copyright notice and
# this notice are preserved.  This file is offered as-is, without any
# warranty.





# Basic/low-level programs and libraires (installed in any case)
# --------------------------------------------------------------
#
# CLASS:BASIC (important identifier for 'awk'; don't modify this line)
bash-version = 5.3.9
binutils-version = 2.45.1
bison-version = 3.8.2
coreutils-version = 9.11
curl-version = 8.17.0
diffutils-version = 3.12
findutils-version = 4.10.0
flock-version = 0.4.0
gawk-version = 5.3.2
gettext-version = 1.0
git-version = 2.52.0
grep-version = 3.12
gzip-version = 1.14
help2man-version = 1.49.3
isl-version = 0.27
less-version = 685
libiconv-version = 1.18
libtool-version = 2.5.4
libunistring-version = 1.4.2
libxml2-version = 2.15.1
lzip-version = 1.25
m4-version = 1.4.21
make-version = 4.4.1
mpc-version = 1.3.1
mpfr-version = 4.2.2
nano-version = 9.0
openssl-version = 3.6.0
perl-version = 5.42.0
readline-version = 8.3.3
sed-version = 4.9
tar-version = 1.35
texinfo-version = 7.2
unzip-version = 6.0
wget-version = 1.25.0
which-version = 2.23
xz-version = 5.6.3
zlib-version = 1.3.1

# Version-dependent build
# -----------------------
#
# When updating the version of these programs/libraries, please look into
# the build rule first: In one way or another, the version string becomes
# necessary during their build and must be accounted for.
bzip2-version = 1.0.8

# PEM Certificate File
# --------------------
#
# This file should be shipped with operating systems and can be found in
# '/etc/ssl/cert.pem' (which may be a symbolic link to its actual
# location). The current version was taken from an up-to-date ArchLinux at
# the date that is also equal to the version.
certpem-version = 2025-02-10

# PatchELF
# --------
#
# PatchELF 0.15 requires a C++ compiler with the 2017 standard. There are
# still systems that don't have such compilers and there hasn't been any
# Maneage-related bug in PatchELF that would need newer versions. So we'll
# stick to this version until the stdc++17 compilers are more commonly
# supported.
patchelf-version = 0.13

# Dash
# ----
#
# Dash 0.5.13.1 causes the build of pkg-config to put the building of
# Maneage within apptainer to go into the background! Forcing the user to
# run 'fg' to continue the build. When updating to a later version, be
# careful about this: that it does not cause this issue.
dash-version = 0.5.12

# Not working with C23
# --------------------
#
# As of GCC 15.1, the default C standard has been changed from C17 to C23
# and the following software cannot be built with C23. So we have added
# '-std=$(GNU_STD_OLD)' to the CFLAGS environment variable in their build
# rules. A test is done in 'configure.sh' to see if the host compiler has
# 'gnu17' and if not, to use 'gnu99'.  After updating a package's version
# (and if you have GCC 15.1 or later) first remove '-std=$(GNU_STD_OLD)'
# and then try the build. If it works, move the software package back up to
# the main list before making a commit.
gmp-version = 6.3.0
file-version = 5.46
ncurses-version = 6.5
pkgconfig-version = 0.29.2

# GCC
# ---
#
# There is a version-specific 'sed -e' fix for a bug in this version of GCC
# that should no longer be necessary in future versions.
gcc-version = 15.2.0




# Optional/high-level programs and libraries
# ------------------------------------------
#
# These are programs and libraries that are optional, The ones in
# 'reproduce/software/config/TARGETS.conf' will be built as
# part of a project. To specify a software there, just remove the
# '-version' suffix from the list below.
#
# CLASS:HIGHLEVEL (important identifier for 'awk'; don't modify this line)
apachelog4cxx-version = 0.12.1
apr-util-version = 1.6.1
apr-version = 1.7.0
astrometrynet-version = 0.91
atlas-version = 3.10.3
autoconf-version = 2.72
automake-version = 1.17
boost-version = 1.87.0
cairo-version = 1.16.0
cdsclient-version = 3.84
cfitsio-version = 4.6.3
cmake-version = 3.31.5
eigen-version = 3.4.0
emacs-version = 28.1
expat-version = 2.6.4
fftw-version = 3.3.10
flex-version = 2.6.4-410-74a89fd
framel-version = 8.47.3
freetype-version = 2.13.3
gdb-version = 11.1
ghostscript-fonts-gnu-version = 6.0
ghostscript-fonts-std-version = 8.11
ghostscript-version = 10.06.0
gnuastro-version = 0.24
gperf-version = 3.1
gsl-version = 2.8
healpix-version = 3.83-2024Nov13
icu-version = 70.1
imagemagick-version = 7.1.0-13
imfit-version = 1.6.1
libbsd-version = 0.11.3
libffi-version = 3.4.7
libidn-version = 1.42
libjpeg-version = 9f
libmd-version = 1.0.4
libnsl-version = 1.2.0-4a062cf
libpaper-version = 1.1.29
libpng-version = 1.6.46
libtiff-version = 4.7.0
libtirpc-version = 1.2.6
metaio-version = 8.5.0-a5da19d
metastore-version = 1.1.2-23-fa9170b
missfits-version = 2.8.0
ninjabuild-version = 1.13.2
openblas-version = 0.3.29
openmpi-version = 5.0.10
openssh-version = 8.0p1
parallel-version = 20260322
patch-version = 2.7.6
pcre-version = 8.44
pcre2-version = 10.45
pixman-version = 0.40.0
plplot-version = 5.15.0
r-cran-version = 4.1.2
rpcsvc-proto-version = 1.4
scamp-version = 2.10.0
scons-version = 3.0.5
sextractor-version = 2.25.0
sqlite-version = 3.53.0
swarp-version = 2.41.5
swig-version = 4.3.1
tcl-version = 9.1a1
tides-version = 2.0
tk-version = 9.1a1
tzdb-version = 2026a
util-linux-version = 2.41.3
valgrind-version = 3.18.1
wcslib-version = 8.5
xlsxio-version = 0.2.21
yaml-version = 0.2.5
zip-version = 3.0-15

# Xorg packages
fontconfig-version = 2.16.0
libice-version = 1.1.2
libpthread-stubs-version = 0.5
libsm-version = 1.2.5
libx11-version = 1.8
libxau-version = 1.0.12
libxcb-version = 1.17.0
libxdmcp-version = 1.1.5
libxext-version = 1.3.6
libxt-version = 1.3.1
util-macros-version = 1.20.2
xcb-proto-version = 1.17.0
xorgproto-version = 2024.1
xtrans-version = 1.5.2

# Not working with C23 (similar to same topic in basic): future versions
# may have fixed this problem, so when updating, first remove '-std=gnu17'
# and if it builds without crashing, put this back in the normal list.
vim-version = 9.0

# Version is in the build recipe
lapack-version = 3.8.0
libgit2-version = 1.9.0

# Python should only be updated by the maintainer for Python packages; see
# https://savannah.nongnu.org/task/?16622.
python-version = 3.13.2

# Netpbm's questions in the configure steps maybe change with different or
# new versions.
netpbm-version = 10.73.39

# Minizip is installed with the same 'zlib' tarball, and they have the same
# version.
minizip-version = $(zlib-version)

# Be careful with updateing hdf5 because h5py 2.10.0 doesn't work with
# version 1.12.0.
hdf5-version = 1.13.1

# The lalsuite tarball within Maneage is based on the upstream commit
# 678514ed of 21 May 2025 of https://git.ligo.org/lscsoft/lalsuite. But
# instead of being a 950 Mb '.tar.gz' file including the '.git/' directory
# (or a 320 Mb '.tar.gz' file without the '.git/' directory), our tarball
# is a 25 Mb '.tar.lz' file (a factor of 30 to 10 times smaller). The main
# difference (apart from the extra compression provided by lzip) is that
# this light tarball does not include the big test data files. A
# description of how this tarball was made and what files have been removed
# is in the 'README-Maneage-LightWeight.md' file that is within the
# tarball.
lalsuite-version = v7.26-15-g1e4c5e5080




# Python packages
# ---------------
#
# Similar to optional programs and libraries above.
#
# IMPORTANT: If you intend to change the version of any of the Python
# modules/libraries below, please fix the hash strings of the respective
# URL in 'reproduce/software/make/python.mk'.
#
# CLASS:PYTHON-START (important identifier for 'awk'; don't modify this line)
astropy-healpix-version = 1.1.2
astropy-iers-data-version = 0.2025.2.24.0.34.4
astropy-version = 7.1.0
beautifulsoup4-version = 4.10.0
cffi-version = 1.15.0
colorama-version = 0.4.6
contourpy-version = 1.3.1
cosmodesi-mpytools-version = 1.0.0-04369fc9
cppy-version = 1.3.1
cycler-version = 0.12.1
cython-version = 3.0.12
exceptiongroup-version = 1.3.0
extension-helpers-version = 1.2.0
features-version = 0.5.12
flake8-version = 3.7.8
flit-core-version = 3.11.0
flit-scm-version = 1.7.0
fonttools-version = 4.56.0
galsim-version = 2.3.5
gpep517-version = 16
h5py-version = 2.10.0
hatch-vcs-version = 0.5.0
hatchling-version = 1.27.0
healpy-version = 1.18.1
html5lib-version = 1.0.1
igwn-ligolw-version = 2.1.0
igwn-segments-version = 2.1.0
iniconfig-version = 2.1.0
jinja2-version = 3.0.3
joblib-version = 1.5.0
kiwisolver-version = 1.4.8
ligo-skymap-version = 2.4.0
lmfit-version = 0.9.14
lscsoft-glue-version = 4.1.0
lsstdesccoord-version = 1.2.0
meson-python-version = 0.17.1
meson-version = 1.7.0
mpi4py-version = 4.0.3
networkx-version = 3.5
numpy-version = 2.2.3
packaging-version = 24.2
pandas-version = 2.2.3
pathspec-version = 0.12.1
pillow-version = 11.1.0
pip-version = 19.0.2
pluggy-version = 1.6.0
pybind11-version = 2.13.6
pyerfa-version = 2.0.1.5
pyfftw-version = 0.15.1
pygments-version = 2.19.2
pyparsing-version = 3.2.1
pyproject-metadata-version = 0.9.0
pytest-version = 8.4.1
python-dateutil-version = 2.9.0.post0
python-installer-version = 0.7.0
python3-fitsio-version = 1.3.0
pythran-version = 0.11.0
pytz-version = 2025.2
pyyaml-version = 6.0.2
requests-version = 2.21.0
scikit-base-version = 0.12.2
scikit-learn-version = 1.6.1
setuptools-scm-version = 8.2.0
setuptools-version = 80.8.0
sip_tpv-version = 1.1
six-version = 1.17.0
sympy-version = 1.4
threadpoolctl-version = 3.6.0
tqdm-version = 4.67.1
trove-classifiers-version = 2025.5.9.12
versioneer-version = 0.29
wheel-version = 0.45.1

# Matplotlib and Scipy are big packages that may have difficulty resolving
# their dependency hell:
matplotlib-version = 3.10.0
scipy-version = 1.15.2

# CLASS:PYTHON-END (important identifier for 'awk'; don't modify this line)





# Problematic software that is currently ignored:

# Setuptools-rust crash (https://savannah.nongnu.org/bugs/index.php?61731),
# so it and its dependencies are being ignored: 'cryptography', and thus
# 'secretstorage' and thus 'keyring' and thus 'astroquery'.
setuptools-rust-version = 1.10.2
semantic-version-version = 2.10.0
#cryptography-version = 36.0.1
#secretstorage-version = 3.1.1
#keyring-version = 18.0.0
#astroquery-version = 0.4

# Not yet adated to the GPEP517 build method:
#asn1crypto-version = 0.24.0
#asteval-version = 0.9.16
#beniget-version = 0.4.1
#certifi-version = 2018.11.29
#chardet-version = 3.0.4
#corner-version = 2.0.1
#eigency-version = 1.77
#emcee-version = 3.0.1
#entrypoints-version = 0.3
#esutil-version = 0.6.9
#future-version = 0.18.1
#gast-version = 0.5.3
#idna-version = 2.8
#jeepney-version = 0.4
#markupsafe-version = 2.0.1
#mpmath-version = 1.1.0
#pexpect-version = 4.7.0
#ply-version = 3.11
#pycodestyle-version = 2.5.0
#pycparser-version = 2.19
#pyflakes-version = 2.1.1
#pypkgconfig-version = 1.5.1
#soupsieve-version = 1.8
#uncertainties-version = 3.1.6
#urllib3-version = 1.24.1
#webencodings-version = 0.5.1





# R-CRAN (i.e. 'R') packages
# ------------------
#
# Similar to optional programs and libraries above.
#
# Notation: The R package and variables associated with it are by default
# called 'R-CRAN' (or 'r-cran') in Maneage, because searching on a single
# letter string 'R' is extremely inefficient.
#
# IMPORTANT: Similar to all software, if you intend to change the version
# of any of the R-CRAN modules/libraries below, please fix the hash strings
# of the respective packages in 'reproduce/software/conf/checksums.conf'.
#
# CLASS:R-CRAN-START (important identifier for 'awk'; don't modify this line)
r-cran-MASS-version = 7.3-54
r-cran-R6-version = 2.5.0
r-cran-RColorBrewer-version = 1.1-2
r-cran-cli-version = 2.5.0
r-cran-colorspace-version = 2.0-1
r-cran-cowplot-version = 1.1.1
r-cran-crayon-version = 1.4.1
r-cran-digest-version = 0.6.27
r-cran-ellipsis-version = 0.3.2
r-cran-fansi-version = 0.5.0
r-cran-farver-version = 2.1.0
r-cran-ggplot2-version = 3.3.4
r-cran-glue-version = 1.4.2
r-cran-gridExtra-version = 2.3
r-cran-gtable-version = 0.3.0
r-cran-isoband-version = 0.2.4
r-cran-labeling-version = 0.4.2
r-cran-lifecycle-version = 1.0.0
r-cran-magrittr-version = 2.0.1
r-cran-mgcv-version = 1.8-36
r-cran-munsell-version = 0.5.0
r-cran-pillar-version = 1.6.1
r-cran-pkgconfig-version = 2.0.3
r-cran-rlang-version = 0.4.11
r-cran-scales-version = 1.1.1
r-cran-tibble-version = 3.1.2
r-cran-utf8-version = 1.2.1
r-cran-vctrs-version = 0.3.8
r-cran-viridisLite-version = 0.4.0
r-cran-withr-version = 2.4.2
# CLASS:R-CRAN-END (important identifier for 'awk'; don't modify this line)