From 9521434ad2e02904251522b0a4e0194e3d38a1b8 Mon Sep 17 00:00:00 2001 From: Raul Infante-Sainz Date: Mon, 18 Feb 2019 16:07:39 +0000 Subject: Installed astroquery in the pipeline All dependencies for building astroquery package have been done. Until nowthe Python dependencies were built in the same Makefile as the high level libraries and programs. But, because astroquery has many dependencies we split the Python and Python packages installation in a new Makefile. The installation of differents packages are done using Python and not pip, because we found some problems when doing it with pip. Apparently there are some interferences between the packages installed by the pip of the system and the pip installed as part of Python in the pipeline. --- reproduce/src/make/dependencies.mk | 36 +++--------------------------------- 1 file changed, 3 insertions(+), 33 deletions(-) (limited to 'reproduce/src/make/dependencies.mk') diff --git a/reproduce/src/make/dependencies.mk b/reproduce/src/make/dependencies.mk index 92febb1..d227dcc 100644 --- a/reproduce/src/make/dependencies.mk +++ b/reproduce/src/make/dependencies.mk @@ -43,10 +43,8 @@ ildir = $(BDIR)/dependencies/installed/lib ilidir = $(BDIR)/dependencies/installed/lib/built # Define the top-level programs to build (installed in `.local/bin'). -top-level-python = astropy -top-level-programs = astnoisechisel metastore flock unzip zip +top-level-programs = astnoisechisel flock metastore unzip zip all: $(ddir)/texlive-versions.tex \ - $(foreach p, $(top-level-python), $(ilidir)/$(p)) \ $(foreach p, $(top-level-programs), $(ibdir)/$(p)) # Other basic environment settings: We are only including the host @@ -89,8 +87,7 @@ export LDFLAGS := $(rpath_command) -L$(ildir) # convention, but include the name/version in their tarball names with # another format, we'll do the modification before the download so the # downloaded file has our desired format. -tarballs = $(foreach t, astropy-$(astropy-version).tar.gz \ - cfitsio-$(cfitsio-version).tar.gz \ +tarballs = $(foreach t, cfitsio-$(cfitsio-version).tar.gz \ cmake-$(cmake-version).tar.gz \ curl-$(curl-version).tar.gz \ flock-$(flock-version).tar.xz \ @@ -104,8 +101,6 @@ tarballs = $(foreach t, astropy-$(astropy-version).tar.gz \ libtool-$(libtool-version).tar.xz \ libgit2-$(libgit2-version).tar.gz \ metastore-$(metastore-version).tar.gz \ - numpy-$(numpy-version).zip \ - python-$(python-version).tar.gz \ unzip-$(unzip-version).tar.gz \ tiff-$(libtiff-version).tar.gz \ wcslib-$(wcslib-version).tar.bz2 \ @@ -122,8 +117,7 @@ $(tarballs): $(tdir)/%: # Set the top download link of the requested tarball. mergenames=1 - if [ $$n = astropy ]; then w=https://files.pythonhosted.org/packages/eb/f7/1251bf6881861f24239efe0c24cbcfc4191ccdbb69ac3e9bb740d0c23352 - elif [ $$n = cfitsio ]; then + if [ $$n = cfitsio ]; then mergenames=0 v=$$(echo $(cfitsio-version) | sed -e's/\.//' \ | awk '{l=length($$1); \ @@ -147,10 +141,6 @@ $(tarballs): $(tdir)/%: mergenames=0 w=https://github.com/libgit2/libgit2/archive/v$(libgit2-version).tar.gz elif [ $$n = metastore ]; then w=http://akhlaghi.org/src - elif [ $$n = numpy ]; then w=https://files.pythonhosted.org/packages/2b/26/07472b0de91851b6656cbc86e2f0d5d3a3128e7580f23295ef58b6862d6c - elif [ $$n = python ]; then - mergenames=0 - w=https://www.python.org/ftp/python/$(python-version)/Python-$(python-version).tgz elif [ $$n = tiff ]; then w=https://download.osgeo.org/libtiff elif [ $$n = unzip ]; then w=ftp://ftp.info-zip.org/pub/infozip/src mergenames=0; v=$$(echo $(unzip-version) | sed -e's/\.//') @@ -456,12 +446,6 @@ endif $$staticopts, -j$(numthreads), \ make check -j$(numthreads)) -$(ibdir)/python3: $(tdir)/python-$(python-version).tar.gz - $(call gbuild, $<, Python-$(python-version)) \ - && v=$$(echo $(python-version) | awk 'BEGIN{FS="."} \ - {printf "%d.%d\n", $$1, $$2}') \ - && ln -s $(ildir)/python$$v $(ildir)/python - $(ibdir)/unzip: $(tdir)/unzip-$(unzip-version).tar.gz v=$$(echo $(unzip-version) | sed -e's/\.//') $(call gbuild, $<, unzip$$v, static,, \ @@ -482,20 +466,6 @@ $(ibdir)/zip: $(tdir)/zip-$(zip-version).tar.gz -# Python packages -# --------------- -$(ilidir)/numpy: $(tdir)/numpy-$(numpy-version).zip \ - $(ibdir)/python3 - pip3 install $< --verbose && echo "numpy is built" > $@ - -$(ilidir)/astropy: $(tdir)/astropy-$(astropy-version).tar.gz \ - $(ilidir)/numpy - pip3 install $< --verbose && echo "astropy is built" > $@ - - - - - # Since we want to avoid complicating the PATH, we are putting a symbolic # link of all the TeX Live executables in $(ibdir). But symbolic links are # hard to track for Make (as a target). Also, TeX in general is optional -- cgit v1.2.1