From 038142425434651655c135917b11d48721e07f6f Mon Sep 17 00:00:00 2001 From: Mohammad Akhlaghi Date: Sun, 23 Jun 2019 21:17:50 +0200 Subject: Added a few slides to better build the case A few slides have been added to clarify the definition of reproducibility and also to show how a paper using Gnuastro needs far fewer dependencies. --- img/digital-tunnel.jpg | Bin 0 -> 107084 bytes img/h2020.jpg | Bin 0 -> 83158 bytes img/h2020.png | Bin 330305 -> 0 bytes img/hale-prime-focus.jpg | Bin 0 -> 55764 bytes img/schrodinger-code.jpg | Bin 0 -> 141305 bytes img/schrodinger-code.png | Bin 899899 -> 0 bytes img/software-cite-highlighted.jpg | Bin 0 -> 460958 bytes img/software-cite-highlighted.png | Bin 759734 -> 0 bytes img/software-cite-no-py-highlighted.jpg | Bin 0 -> 159495 bytes img/software-cite-no-py.jpg | Bin 0 -> 150066 bytes img/software-cite.jpg | Bin 0 -> 421406 bytes img/software-cite.png | Bin 729463 -> 0 bytes reproducible-paper.tex | 78 +++++++++++++++++++++++++++++--- 13 files changed, 72 insertions(+), 6 deletions(-) create mode 100644 img/digital-tunnel.jpg create mode 100644 img/h2020.jpg delete mode 100644 img/h2020.png create mode 100644 img/hale-prime-focus.jpg create mode 100644 img/schrodinger-code.jpg delete mode 100644 img/schrodinger-code.png create mode 100644 img/software-cite-highlighted.jpg delete mode 100644 img/software-cite-highlighted.png create mode 100644 img/software-cite-no-py-highlighted.jpg create mode 100644 img/software-cite-no-py.jpg create mode 100644 img/software-cite.jpg delete mode 100644 img/software-cite.png diff --git a/img/digital-tunnel.jpg b/img/digital-tunnel.jpg new file mode 100644 index 0000000..c316553 Binary files /dev/null and b/img/digital-tunnel.jpg differ diff --git a/img/h2020.jpg b/img/h2020.jpg new file mode 100644 index 0000000..81c3d0e Binary files /dev/null and b/img/h2020.jpg differ diff --git a/img/h2020.png b/img/h2020.png deleted file mode 100644 index 3db57b9..0000000 Binary files a/img/h2020.png and /dev/null differ diff --git a/img/hale-prime-focus.jpg b/img/hale-prime-focus.jpg new file mode 100644 index 0000000..5670a28 Binary files /dev/null and b/img/hale-prime-focus.jpg differ diff --git a/img/schrodinger-code.jpg b/img/schrodinger-code.jpg new file mode 100644 index 0000000..2edc08f Binary files /dev/null and b/img/schrodinger-code.jpg differ diff --git a/img/schrodinger-code.png b/img/schrodinger-code.png deleted file mode 100644 index 3cd5983..0000000 Binary files a/img/schrodinger-code.png and /dev/null differ diff --git a/img/software-cite-highlighted.jpg b/img/software-cite-highlighted.jpg new file mode 100644 index 0000000..81bf1bf Binary files /dev/null and b/img/software-cite-highlighted.jpg differ diff --git a/img/software-cite-highlighted.png b/img/software-cite-highlighted.png deleted file mode 100644 index dd9d005..0000000 Binary files a/img/software-cite-highlighted.png and /dev/null differ diff --git a/img/software-cite-no-py-highlighted.jpg b/img/software-cite-no-py-highlighted.jpg new file mode 100644 index 0000000..63ed9e8 Binary files /dev/null and b/img/software-cite-no-py-highlighted.jpg differ diff --git a/img/software-cite-no-py.jpg b/img/software-cite-no-py.jpg new file mode 100644 index 0000000..58fc9a4 Binary files /dev/null and b/img/software-cite-no-py.jpg differ diff --git a/img/software-cite.jpg b/img/software-cite.jpg new file mode 100644 index 0000000..2932546 Binary files /dev/null and b/img/software-cite.jpg differ diff --git a/img/software-cite.png b/img/software-cite.png deleted file mode 100644 index 720d8a2..0000000 Binary files a/img/software-cite.png and /dev/null differ diff --git a/reproducible-paper.tex b/reproducible-paper.tex index 0952741..1c9bb6c 100644 --- a/reproducible-paper.tex +++ b/reproducible-paper.tex @@ -115,9 +115,13 @@ \end{tcolorbox} \end{frame} + + + + \begin{frame} \centering - \includegraphics[width=0.45\linewidth]{img/schrodinger-code.png} + \includegraphics[width=0.45\linewidth]{img/schrodinger-code.jpg} \footnotesize Original image from \href{https://www.redbubble.com/people/seriesclothing/works/28520432-the-flash-ciscos-shirt-wanted-dead-and-alive-scr-dingers-cat}{\texttt{https://www.redbubble.com}} \end{frame} @@ -125,6 +129,56 @@ + + \begin{frame}[t]{Types of reproducibility} + \vspace{-5mm} + \begin{columns}[t] + \column{0.5\linewidth} + \begin{center} + \large\textbf{Hardware/Statistical reproducibility} + \rule{0.5\linewidth}{1pt} + \end{center} + \begin{itemize} + \setlength\itemsep{1.5em} + \item Involves data \alert{collection}. + \item Inherently includes \alert{measurements errors}\\(can + never be exactly reproduced). + \item Example: Raw telescope image/spectra. + \end{itemize} + + \vspace{3.5mm} + \begin{center} + \vspace{-5mm} + \includegraphics[width=0.7\linewidth]{img/hale-prime-focus.jpg}\\ + \vspace{-0.6mm} + \tiny \href{http://slittlefair.staff.shef.ac.uk/teaching/phy217/lectures/telescopes/L07/index.html}{http://slittlefair.staff.shef.ac.uk} + \end{center} + + \column{0.5\linewidth} + \begin{center} + \large\textbf{Software/Exact reproducibility} + \rule{0.5\linewidth}{1pt} + \end{center} + \begin{itemize} + \setlength\itemsep{1.5em} + \item Involves data \alert{analysis}, or simulations. + \item Starts \alert{after} data is collected/digitized. + \item Example: $2+2=4$ (i.e., sum of datasets). + \item \textbf{\textcolor{green!50!black}{The type discussed here.}} + \end{itemize} + + \centering + \vspace{1mm} + \includegraphics[width=0.8\linewidth]{img/digital-tunnel.jpg}\\ + \vspace{-0.6mm} + \tiny \href{https://tsongas.com/newsletter_articles/the-new-electronic-version-of-the-advantage/digital-tunnel-wallpaper/}{https://tsongas.com} + \end{columns} + \end{frame} + + + + + %% Step-by-step slides. \newcommand{\allopacity}{1} \begin{frame}{General outline of a project} \include{tex/project-graph} \end{frame} @@ -452,13 +506,25 @@ - \begin{frame}{Software acknowledgment and citation automatically generated in paper} + \begin{frame}{Software citation automatically generated in paper (including Astropy)} + \centering + \includegraphics[width=0.8\linewidth]{img/software-cite.jpg} + \end{frame} + \begin{frame}{Software citation automatically generated in paper (including Astropy)} + \centering + \includegraphics[width=0.8\linewidth]{img/software-cite-highlighted.jpg} + \end{frame} + + + + + \begin{frame}{Software citation automatically generated in paper (only GNU Astronomy Utilities)} \centering - \includegraphics[width=0.8\linewidth]{img/software-cite.png} + \includegraphics[width=0.4\linewidth]{img/software-cite-no-py.jpg} \end{frame} - \begin{frame}{Software acknowledgment and citation automatically generated in paper} + \begin{frame}{Software citation automatically generated in paper (only GNU Astronomy Utilities)} \centering - \includegraphics[width=0.8\linewidth]{img/software-cite-highlighted.png} + \includegraphics[width=0.4\linewidth]{img/software-cite-no-py-highlighted.jpg} \end{frame} @@ -739,7 +805,7 @@ \includegraphics[width=3cm]{img/rda.png}\hspace{1cm} \includegraphics[width=1.8cm]{img/iac.png} - \includegraphics[width=\linewidth]{img/h2020.png} + \includegraphics[width=\linewidth]{img/h2020.jpg} \end{center} \vspace{1cm} For this template, the \alert{IAC} is selected as -- cgit v1.2.1