# Verify the project outputs before building the paper. # # Copyright (C) 2020 Mohammad Akhlaghi # # This file is part of Maneage. Maneage is free software: you can # redistribute it and/or modify it under the terms of the GNU General # Public License as published by the Free Software Foundation, either # version 3 of the License, or (at your option) any later version. # # Maneage is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or # FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for # more details. See . # Verification functions # ---------------------- # # These functions are used by the final rule in this Makefil verify-print-error-start = \ echo; \ echo "VERIFICATION ERROR"; \ echo "------------------"; \ echo verify-print-tips = \ echo "If you are still developing your project, you can disable"; \ echo "verification by removing the value of the variable in the"; \ echo "following file (from the top project source directory):"; \ echo " reproduce/analysis/config/verify-outputs.conf"; \ echo; \ echo "If this is the final version of the file, you can just copy"; \ echo "and paste the calculated checksum (above) for the file in"; \ echo "the following project source file:"; \ echo " reproduce/analysis/make/verify.mk" verify-txt-no-comments-leading-space = \ infile=$(strip $(1)); \ inchecksum=$(strip $(2)); \ if ! [ -f "$$infile" ]; then \ $(call verify-print-error-start); \ echo "The following file (that should be verified) doesn't exist:"; \ echo " $$infile"; \ echo; exit 1; \ fi; \ checksum=$$(sed -e 's/^[[:space:]]*//g' \ -e 's/\#.*$$//' \ -e '/^$$/d' $$infile \ | md5sum \ | awk '{print $$1}'); \ if [ x"$$inchecksum" = x"$$checksum" ]; then \ echo "Verified: $$infile"; \ else \ $(call verify-print-error-start); \ $(call verify-print-tips); \ echo; \ echo "Checked file (without empty or commented lines):"; \ echo " $$infile"; \ echo "Expected MD5 checksum: $$inchecksum"; \ echo "Calculated MD5 checksum: $$checksum"; \ echo; exit 1; \ fi; # Final verification TeX macro (can be empty) # ------------------------------------------- # # This is the FINAL analysis step (before going onto the paper. Please use # this step to veryify the contents of the figures/tables used in the paper # and the LaTeX macros generated from all your processing. It should depend # on all the LaTeX macro files that are generated (their contents will be # checked), and any files that go into the tables/figures of the paper # (generated in various stages of the analysis. # # Since each analysis step's data files are already prerequisites of their # respective TeX macro file, its enough for `verify.tex' to depend on the # final TeX macro. # # USEFUL TIP: during the early phases of your research (when you are # developing your analysis, and the values aren't final), you can comment # the respective lines. # # Here is a description of the variables defined here. # # verify-dep: The major step dependencies of `verify.tex', this includes # all the steps that must be finished before it. # # verify-changes: The files whose contents are important. This is # essentially the same as `verify-dep', but it has removed # the `initialize' step (which is information about the # pipeline, not the results). verify-dep = $(subst verify,,$(subst paper,,$(makesrc))) verify-check = $(subst initialize,,$(verify-dep)) $(mtexdir)/verify.tex: $(foreach s, $(verify-dep), $(mtexdir)/$(s).tex) # Make sure that verification is actually requested. if [ x"$(verify-outputs)" = xyes ]; then # Verify the figure datasets. $(call verify-txt-no-comments-leading-space, \ $(delete-num), ad345e873e6af577f0e4e7c8942cdf08) $(call verify-txt-no-comments-leading-space, \ $(delete-histogram), 12a81c4c8c5f552e5ed5686453587fe8) # Verify TeX macros (the values that go into the PDF text). for m in $(verify-check); do file=$(mtexdir)/$$m.tex if [ $$m == download ]; then s=6749e17ce606d57d30cebdbc1a5d23ad elif [ $$m == delete-me ]; then s=711e2f7fa1f16ecbeeb3df6bcb4ec705 else echo; echo "'$$m' not recognized."; exit 1 fi $(call verify-txt-no-comments-leading-space, $$file, $$s) done fi # Make an empty final target. touch $@