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2019-04-02Copyright notice added to remaining filesMohammad Akhlaghi-0/+5
After doing a systematic search for files without a copyright notice, a few more were found that didn't have a notice. So a notice was added for them. I used this Bash command to find the files: for f in $(find ./ -type f); do \ if [[ $f != *.git* ]]; then \ n=$(grep -i copyright $f | wc -l); \ echo "$n $f"; \ fi; \ done | awk '$1==0'
2018-08-11Minor edits in comments of .dir-locals.elMohammad Akhlaghi-5/+8
To be more easy to read/understand, the comments in `.dir-locals.el' were edited and made a little more elaborate.
2018-08-11Problem with tabs in .mk file corrected in dir-locals.elMohammad Akhlaghi-8/+7
Previously we had tried to corrected the problem that `.mk' files use space instead of TAB by setting them to be read into makefile-mode at the start. However, for some reason, this caused a problem in reading the maximum line length (the value of 75 wasn't read by Emacs). So after some playing around, I found out that the problem is that the `nil' setting (for all other files) must be defined in the end, not the start of the basic settings and this solved this problem.
2018-07-08Files with .mk suffix as Makefiles in EmacsMohammad Akhlaghi-0/+4
Since version 26.1, apparently Emacs doesn't tream `.mk' files in Makefile-mode. So thanks to Mosè Giordano, a line was added in the `.dir-locals.el' file so we can be sure they are always treated as Makefiles and make things more convenient for Emacs users.
2018-02-07First commit to the reproduction pipeline templateMohammad Akhlaghi-0/+20
Let's start working on this pipeline independently with this first commit. It is based on my previous experiences, but I had never made a skeleton of a pipeline before, it was always within a working analysis. But now that the pipeline has a separate repository for its self, we will be able to work on it and use it as a base for future work and modify it to make it even better. Hopefully in time (and with the help of others), it will grow and become much more robust and useful.