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-rw-r--r--reproduce/software/make/python.mk272
1 files changed, 136 insertions, 136 deletions
diff --git a/reproduce/software/make/python.mk b/reproduce/software/make/python.mk
index 558de56..1a7be56 100644
--- a/reproduce/software/make/python.mk
+++ b/reproduce/software/make/python.mk
@@ -58,46 +58,46 @@ export MPI_PYTHON3_SITEARCH :=
# convention, but include the name/version in their tarball names with
# another format, we'll do the modification before the download so the
# downloaded file has our desired format.
-pytarballs = $(foreach t, asn1crypto-$(asn1crypto-version).tar.gz \
- astroquery-$(astroquery-version).tar.gz \
- astropy-$(astropy-version).tar.gz \
- beautifulsoup4-$(beautifulsoup4-version).tar.gz \
- certifi-$(certifi-version).tar.gz \
- cffi-$(cffi-version).tar.gz \
- chardet-$(chardet-version).tar.gz \
- cryptography-$(cryptography-version).tar.gz \
- cycler-$(cycler-version).tar.gz \
- cython-$(cython-version).tar.gz \
- entrypoints-$(entrypoints-version).tar.gz \
- h5py-$(h5py-version).tar.gz \
- html5lib-$(html5lib-version).tar.gz \
- idna-$(idna-version).tar.gz \
- jeepney-$(jeepney-version).tar.gz \
- kiwisolver-$(kiwisolver-version).tar.gz \
- keyring-$(keyring-version).tar.gz \
- libffi-$(libffi-version).tar.gz \
- matplotlib-$(matplotlib-version).tar.gz \
- mpi4py-$(mpi4py-version).tar.gz \
- mpmath-$(mpmath-version).tar.gz \
- numpy-$(numpy-version).zip \
- pkgconfig-$(pypkgconfig-version).tar.gz \
- pip-$(pip-version).tar.gz \
- pycparser-$(pycparser-version).tar.gz \
- python-$(python-version).tar.gz \
+pytarballs = $(foreach t, asn1crypto-$(asn1crypto-version).tar.gz \
+ astroquery-$(astroquery-version).tar.gz \
+ astropy-$(astropy-version).tar.gz \
+ beautifulsoup4-$(beautifulsoup4-version).tar.gz \
+ certifi-$(certifi-version).tar.gz \
+ cffi-$(cffi-version).tar.gz \
+ chardet-$(chardet-version).tar.gz \
+ cryptography-$(cryptography-version).tar.gz \
+ cycler-$(cycler-version).tar.gz \
+ cython-$(cython-version).tar.gz \
+ entrypoints-$(entrypoints-version).tar.gz \
+ h5py-$(h5py-version).tar.gz \
+ html5lib-$(html5lib-version).tar.gz \
+ idna-$(idna-version).tar.gz \
+ jeepney-$(jeepney-version).tar.gz \
+ kiwisolver-$(kiwisolver-version).tar.gz \
+ keyring-$(keyring-version).tar.gz \
+ libffi-$(libffi-version).tar.gz \
+ matplotlib-$(matplotlib-version).tar.gz \
+ mpi4py-$(mpi4py-version).tar.gz \
+ mpmath-$(mpmath-version).tar.gz \
+ numpy-$(numpy-version).zip \
+ pkgconfig-$(pypkgconfig-version).tar.gz \
+ pip-$(pip-version).tar.gz \
+ pycparser-$(pycparser-version).tar.gz \
+ python-$(python-version).tar.gz \
python-dateutil-$(python-dateutil-version).tar.gz \
- pyparsing-$(pyparsing-version).tar.gz \
- requests-$(requests-version).tar.gz \
- scipy-$(scipy-version).tar.gz \
- secretstorage-$(secretstorage-version).tar.gz \
- setuptools-$(setuptools-version).zip \
- setuptools_scm-$(setuptools_scm-version).tar.gz \
- sip_tpv-$(sip_tpv-version).tar.gz \
- six-$(six-version).tar.gz \
- soupsieve-$(soupsieve-version).tar.gz \
- sympy-$(sympy-version).tar.gz \
- urllib3-$(urllib3-version).tar.gz \
- webencodings-$(webencodings-version).tar.gz \
- virtualenv-$(virtualenv-version).tar.gz \
+ pyparsing-$(pyparsing-version).tar.gz \
+ requests-$(requests-version).tar.gz \
+ scipy-$(scipy-version).tar.gz \
+ secretstorage-$(secretstorage-version).tar.gz \
+ setuptools-$(setuptools-version).zip \
+ setuptools_scm-$(setuptools_scm-version).tar.gz \
+ sip_tpv-$(sip_tpv-version).tar.gz \
+ six-$(six-version).tar.gz \
+ soupsieve-$(soupsieve-version).tar.gz \
+ sympy-$(sympy-version).tar.gz \
+ urllib3-$(urllib3-version).tar.gz \
+ webencodings-$(webencodings-version).tar.gz \
+ virtualenv-$(virtualenv-version).tar.gz \
, $(tdir)/$(t) )
pytopurl=https://files.pythonhosted.org/packages
$(pytarballs): $(tdir)/%:
@@ -225,22 +225,22 @@ $(ibidir)/libffi: $(tdir)/libffi-$(libffi-version).tar.gz
$(ibidir)/python: $(tdir)/python-$(python-version).tar.gz \
$(ibidir)/libffi
- # On Mac systems, the build complains about `clang' specific
- # features, so we can't use our own GCC build here.
- if [ x$(on_mac_os) = xyes ]; then \
- export CC=clang; \
- export CXX=clang++; \
- fi; \
- $(call gbuild, $<, Python-$(python-version),, \
- --without-ensurepip \
- --with-system-ffi \
- --enable-shared) \
+ # On Mac systems, the build complains about `clang' specific
+ # features, so we can't use our own GCC build here.
+ if [ x$(on_mac_os) = xyes ]; then \
+ export CC=clang; \
+ export CXX=clang++; \
+ fi; \
+ $(call gbuild, $<, Python-$(python-version),, \
+ --without-ensurepip \
+ --with-system-ffi \
+ --enable-shared) \
&& v=$$(echo $(python-version) | awk 'BEGIN{FS="."} \
- {printf "%d.%d\n", $$1, $$2}') \
- && ln -sf $(ildir)/python$$v $(ildir)/python \
- && ln -sf $(ibdir)/python$$v $(ibdir)/python \
- && rm -rf $(ipydir) \
- && mkdir $(ipydir) \
+ {printf "%d.%d\n", $$1, $$2}') \
+ && ln -sf $(ildir)/python$$v $(ildir)/python \
+ && ln -sf $(ibdir)/python$$v $(ibdir)/python \
+ && rm -rf $(ipydir) \
+ && mkdir $(ipydir) \
&& echo "Python $(python-version)" > $@
@@ -258,18 +258,18 @@ $(ibidir)/python: $(tdir)/python-$(python-version).tar.gz \
# 3) Unpacked directory name after unpacking the tarball
# 4) site.cfg file (optional)
# 5) Official software name.(for paper).
-pybuild = cd $(ddir); rm -rf $(3); \
+pybuild = cd $(ddir); rm -rf $(3); \
if ! $(1) $(2); then echo; echo "Tar error"; exit 1; fi; \
- cd $(3); \
- if [ "x$(strip $(4))" != x ]; then \
- sed -e 's|@LIBDIR[@]|'"$(ildir)"'|' \
- -e 's|@INCDIR[@]|'"$(idir)/include"'|' \
- $(4) > site.cfg; \
- fi; \
- python setup.py build \
- && python setup.py install \
- && cd .. \
- && rm -rf $(3) \
+ cd $(3); \
+ if [ "x$(strip $(4))" != x ]; then \
+ sed -e 's|@LIBDIR[@]|'"$(ildir)"'|' \
+ -e 's|@INCDIR[@]|'"$(idir)/include"'|' \
+ $(4) > site.cfg; \
+ fi; \
+ python setup.py build \
+ && python setup.py install \
+ && cd .. \
+ && rm -rf $(3) \
&& echo "$(5)" > $@
@@ -285,22 +285,22 @@ $(ipydir)/asn1crypto: $(tdir)/asn1crypto-$(asn1crypto-version).tar.gz \
$(call pybuild, tar xf, $<, asn1crypto-$(asn1crypto-version), , \
Asn1crypto $(asn1crypto-version))
-$(ipydir)/astroquery: $(tdir)/astroquery-$(astroquery-version).tar.gz \
- $(ipydir)/beautifulsoup4 \
- $(ipydir)/html5lib \
- $(ipydir)/requests \
- $(ipydir)/astropy \
- $(ipydir)/keyring \
+$(ipydir)/astroquery: $(tdir)/astroquery-$(astroquery-version).tar.gz \
+ $(ipydir)/beautifulsoup4 \
+ $(ipydir)/html5lib \
+ $(ipydir)/requests \
+ $(ipydir)/astropy \
+ $(ipydir)/keyring \
$(ipydir)/numpy
$(call pybuild, tar xf, $<, astroquery-$(astroquery-version), ,\
Astroquery $(astroquery-version))
$(ipydir)/astropy: $(tdir)/astropy-$(astropy-version).tar.gz \
- $(ipydir)/h5py \
- $(ipydir)/numpy \
+ $(ipydir)/h5py \
+ $(ipydir)/numpy \
$(ipydir)/scipy
$(call pybuild, tar xf, $<, astropy-$(astropy-version)) \
- && cp $(dtexdir)/astropy.tex $(ictdir)/ \
+ && cp $(dtexdir)/astropy.tex $(ictdir)/ \
&& echo "Astropy $(astropy-version) \citep{astropy2013,astropy2018}" > $@
$(ipydir)/beautifulsoup4: $(tdir)/beautifulsoup4-$(beautifulsoup4-version).tar.gz \
@@ -314,8 +314,8 @@ $(ipydir)/certifi: $(tdir)/certifi-$(certifi-version).tar.gz \
Certifi $(certifi-version))
$(ipydir)/cffi: $(tdir)/cffi-$(cffi-version).tar.gz \
- $(ibidir)/libffi \
- $(ipydir)/pycparser
+ $(ipydir)/pycparser \
+ $(ibidir)/libffi
$(call pybuild, tar xf, $<, cffi-$(cffi-version), ,\
cffi $(cffi-version))
@@ -325,7 +325,7 @@ $(ipydir)/chardet: $(tdir)/chardet-$(chardet-version).tar.gz \
Chardet $(chardet-version))
$(ipydir)/cryptography: $(tdir)/cryptography-$(cryptography-version).tar.gz \
- $(ipydir)/asn1crypto \
+ $(ipydir)/asn1crypto \
$(ipydir)/cffi
$(call pybuild, tar xf, $<, cryptography-$(cryptography-version), ,\
Cryptography $(cryptography-version))
@@ -338,7 +338,7 @@ $(ipydir)/cycler: $(tdir)/cycler-$(cycler-version).tar.gz \
$(ipydir)/cython: $(tdir)/cython-$(cython-version).tar.gz \
$(ipydir)/setuptools
$(call pybuild, tar xf, $<, Cython-$(cython-version)) \
- && cp $(dtexdir)/cython.tex $(ictdir)/ \
+ && cp $(dtexdir)/cython.tex $(ictdir)/ \
&& echo "Cython $(cython-version) \citep{cython2011}" > $@
$(ipydir)/entrypoints: $(tdir)/entrypoints-$(entrypoints-version).tar.gz \
@@ -347,21 +347,21 @@ $(ipydir)/entrypoints: $(tdir)/entrypoints-$(entrypoints-version).tar.gz \
EntryPoints $(entrypoints-version))
$(ipydir)/h5py: $(tdir)/h5py-$(h5py-version).tar.gz \
- $(ipydir)/cython \
- $(ibidir)/hdf5 \
- $(ipydir)/numpy \
- $(ipydir)/pypkgconfig \
- $(ipydir)/setuptools \
+ $(ipydir)/pypkgconfig \
+ $(ipydir)/setuptools \
+ $(ipydir)/cython \
+ $(ipydir)/numpy \
+ $(ibidir)/hdf5 \
$(ipydir)/six
#$(ipydir)/mpi4py # AFTER its problem is fixed.
- #export HDF5_MPI=ON; # AFTER its problem is fixed.
- export HDF5_DIR=$(ildir); \
+ #export HDF5_MPI=ON; # AFTER its problem is fixed.
+ export HDF5_DIR=$(ildir); \
$(call pybuild, tar xf, $<, h5py-$(h5py-version), ,\
h5py $(h5py-version))
$(ipydir)/html5lib: $(tdir)/html5lib-$(html5lib-version).tar.gz \
- $(ipydir)/six \
- $(ipydir)/webencodings
+ $(ipydir)/webencodings \
+ $(ipydir)/six
$(call pybuild, tar xf, $<, html5lib-$(html5lib-version), ,\
HTML5lib $(html5lib-version))
@@ -375,27 +375,27 @@ $(ipydir)/jeepney: $(tdir)/jeepney-$(jeepney-version).tar.gz \
$(call pybuild, tar xf, $<, jeepney-$(jeepney-version), ,\
Jeepney $(jeepney-version))
-$(ipydir)/keyring: $(tdir)/keyring-$(keyring-version).tar.gz \
- $(ipydir)/entrypoints \
- $(ipydir)/secretstorage \
- $(ipydir)/setuptools_scm
+$(ipydir)/keyring: $(tdir)/keyring-$(keyring-version).tar.gz \
+ $(ipydir)/setuptools_scm \
+ $(ipydir)/secretstorage \
+ $(ipydir)/entrypoints
$(call pybuild, tar xf, $<, keyring-$(keyring-version), ,\
Keyring $(keyring-version))
-$(ipydir)/kiwisolver: $(tdir)/kiwisolver-$(kiwisolver-version).tar.gz \
+$(ipydir)/kiwisolver: $(tdir)/kiwisolver-$(kiwisolver-version).tar.gz \
$(ipydir)/setuptools
$(call pybuild, tar xf, $<, kiwisolver-$(kiwisolver-version), ,\
Kiwisolver $(kiwisolver-version))
-$(ipydir)/matplotlib: $(tdir)/matplotlib-$(matplotlib-version).tar.gz \
- $(ipydir)/cycler \
- $(ibidir)/freetype \
- $(ipydir)/kiwisolver \
- $(ipydir)/numpy \
- $(ipydir)/pyparsing \
- $(ipydir)/python-dateutil
+$(ipydir)/matplotlib: $(tdir)/matplotlib-$(matplotlib-version).tar.gz \
+ $(ipydir)/python-dateutil \
+ $(ipydir)/kiwisolver \
+ $(ipydir)/pyparsing \
+ $(ibidir)/freetype \
+ $(ipydir)/cycler \
+ $(ipydir)/numpy
$(call pybuild, tar xf, $<, matplotlib-$(matplotlib-version)) \
- && cp $(dtexdir)/matplotlib.tex $(ictdir)/ \
+ && cp $(dtexdir)/matplotlib.tex $(ictdir)/ \
&& echo "Matplotlib $(matplotlib-version) \citep{matplotlib2007}" > $@
# Currently mpi4py doesn't build because of some conflict with OpenMPI:
@@ -408,10 +408,10 @@ $(ipydir)/matplotlib: $(tdir)/matplotlib-$(matplotlib-version).tar.gz \
#
# But atleast on my system it fails.
$(ipydir)/mpi4py: $(tdir)/mpi4py-$(mpi4py-version).tar.gz \
- $(ipydir)/setuptools \
+ $(ipydir)/setuptools \
$(ibidir)/openmpi
$(call pybuild, tar xf, $<, mpi4py-$(mpi4py-version)) \
- && cp $(dtexdir)/mpi4py.tex $(ictdir)/ \
+ && cp $(dtexdir)/mpi4py.tex $(ictdir)/ \
&& echo "mpi4py $(mpi4py-version) \citep{mpi4py2011}" > $@
$(ipydir)/mpmath: $(tdir)/mpmath-$(mpmath-version).tar.gz \
@@ -420,18 +420,18 @@ $(ipydir)/mpmath: $(tdir)/mpmath-$(mpmath-version).tar.gz \
mpmath $(mpmath-version))
$(ipydir)/numpy: $(tdir)/numpy-$(numpy-version).zip \
- $(ipydir)/setuptools \
- $(ibidir)/openblas \
+ $(ipydir)/setuptools \
+ $(ibidir)/openblas \
$(ibidir)/unzip
- if [ x$(on_mac_os) = xyes ]; then \
- export LDFLAGS="$(LDFLAGS) -undefined dynamic_lookup -bundle"; \
- else \
- export LDFLAGS="$(LDFLAGS) -shared"; \
- fi; \
+ if [ x$(on_mac_os) = xyes ]; then \
+ export LDFLAGS="$(LDFLAGS) -undefined dynamic_lookup -bundle"; \
+ else \
+ export LDFLAGS="$(LDFLAGS) -shared"; \
+ fi; \
conf="$$(pwd)/reproduce/software/config/installation/numpy-scipy.cfg"; \
- $(call pybuild, unzip, $<, numpy-$(numpy-version),$$conf, \
- Numpy $(numpy-version)) \
- && cp $(dtexdir)/numpy.tex $(ictdir)/ \
+ $(call pybuild, unzip, $<, numpy-$(numpy-version),$$conf, \
+ Numpy $(numpy-version)) \
+ && cp $(dtexdir)/numpy.tex $(ictdir)/ \
&& echo "Numpy $(numpy-version) \citep{numpy2011}" > $@
$(ibidir)/pip3: $(tdir)/pip-$(pip-version).tar.gz \
@@ -455,40 +455,40 @@ $(ipydir)/pyparsing: $(tdir)/pyparsing-$(pyparsing-version).tar.gz \
PyParsing $(pyparsing-version))
$(ipydir)/python-dateutil: $(tdir)/python-dateutil-$(python-dateutil-version).tar.gz \
- $(ipydir)/setuptools_scm \
+ $(ipydir)/setuptools_scm \
$(ipydir)/six
$(call pybuild, tar xf, $<, python-dateutil-$(python-dateutil-version), ,\
python-dateutil $(python-dateutil-version))
-$(ipydir)/requests: $(tdir)/requests-$(requests-version).tar.gz \
- $(ipydir)/certifi \
- $(ipydir)/chardet \
- $(ipydir)/idna \
- $(ipydir)/numpy \
- $(ipydir)/urllib3
+$(ipydir)/requests: $(tdir)/requests-$(requests-version).tar.gz \
+ $(ipydir)/certifi \
+ $(ipydir)/chardet \
+ $(ipydir)/urllib3 \
+ $(ipydir)/numpy \
+ $(ipydir)/idna
$(call pybuild, tar xf, $<, requests-$(requests-version), ,\
Requests $(requests-version))
$(ipydir)/scipy: $(tdir)/scipy-$(scipy-version).tar.gz \
$(ipydir)/numpy
- if [ x$(on_mac_os) = xyes ]; then \
- export LDFLAGS="$(LDFLAGS) -undefined dynamic_lookup -bundle"; \
- else \
- export LDFLAGS="$(LDFLAGS) -shared"; \
- fi; \
+ if [ x$(on_mac_os) = xyes ]; then \
+ export LDFLAGS="$(LDFLAGS) -undefined dynamic_lookup -bundle"; \
+ else \
+ export LDFLAGS="$(LDFLAGS) -shared"; \
+ fi; \
conf="$$(pwd)/reproduce/software/config/installation/numpy-scipy.cfg"; \
- $(call pybuild, tar xf, $<, scipy-$(scipy-version),$$conf) \
- && cp $(dtexdir)/scipy.tex $(ictdir)/ \
+ $(call pybuild, tar xf, $<, scipy-$(scipy-version),$$conf) \
+ && cp $(dtexdir)/scipy.tex $(ictdir)/ \
&& echo "Scipy $(scipy-version) \citep{scipy2007,scipy2011}" > $@
$(ipydir)/secretstorage: $(tdir)/secretstorage-$(secretstorage-version).tar.gz \
- $(ipydir)/cryptography \
+ $(ipydir)/cryptography \
$(ipydir)/jeepney
$(call pybuild, tar xf, $<, SecretStorage-$(secretstorage-version), ,\
SecretStorage $(secretstorage-version))
$(ipydir)/setuptools: $(tdir)/setuptools-$(setuptools-version).zip \
- $(ibidir)/python \
+ $(ibidir)/python \
$(ibidir)/unzip
$(call pybuild, unzip, $<, setuptools-$(setuptools-version), ,\
Setuptools $(setuptools-version))
@@ -498,12 +498,12 @@ $(ipydir)/setuptools_scm: $(tdir)/setuptools_scm-$(setuptools_scm-version).tar.g
$(call pybuild, tar xf, $<, setuptools_scm-$(setuptools_scm-version), ,\
Setuptools-scm $(setuptools_scm-version))
-$(ipydir)/sip_tpv: $(tdir)/sip_tpv-$(sip_tpv-version).tar.gz \
- $(ipydir)/astropy \
- $(ipydir)/numpy \
+$(ipydir)/sip_tpv: $(tdir)/sip_tpv-$(sip_tpv-version).tar.gz \
+ $(ipydir)/astropy \
+ $(ipydir)/numpy \
$(ipydir)/sympy
$(call pybuild, tar xf, $<, sip_tpv-$(sip_tpv-version), ,) \
- && cp $(dtexdir)/sip_tpv.tex $(ictdir)/ \
+ && cp $(dtexdir)/sip_tpv.tex $(ictdir)/ \
&& echo "sip\_tpv $(sip_tpv-version) \citep{sip-tpv}" > $@
@@ -517,11 +517,11 @@ $(ipydir)/soupsieve: $(tdir)/soupsieve-$(soupsieve-version).tar.gz \
$(call pybuild, tar xf, $<, soupsieve-$(soupsieve-version), ,\
SoupSieve $(soupsieve-version))
-$(ipydir)/sympy: $(tdir)/sympy-$(sympy-version).tar.gz \
- $(ipydir)/mpmath \
- $(ipydir)/setuptools
+$(ipydir)/sympy: $(tdir)/sympy-$(sympy-version).tar.gz \
+ $(ipydir)/setuptools \
+ $(ipydir)/mpmath
$(call pybuild, tar xf, $<, sympy-$(sympy-version), ,) \
- && cp $(dtexdir)/sympy.tex $(ictdir)/ \
+ && cp $(dtexdir)/sympy.tex $(ictdir)/ \
&& echo "SymPy $(sympy-version) \citep{sympy}" > $@
$(ipydir)/urllib3: $(tdir)/urllib3-$(urllib3-version).tar.gz \
generated by cgit v1.2.1 (git 2.18.0) at 2024-05-03 06:53:22 +0000