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-rw-r--r--reproduce/software/bibtex/astropy.tex97
-rw-r--r--reproduce/software/bibtex/cython.tex21
-rw-r--r--reproduce/software/bibtex/fftw.tex19
-rw-r--r--reproduce/software/bibtex/gnuastro.tex24
-rw-r--r--reproduce/software/bibtex/matplotlib.tex22
-rw-r--r--reproduce/software/bibtex/mpi4py.tex20
-rw-r--r--reproduce/software/bibtex/numpy.tex23
-rw-r--r--reproduce/software/bibtex/scipy.tex34
8 files changed, 260 insertions, 0 deletions
diff --git a/reproduce/software/bibtex/astropy.tex b/reproduce/software/bibtex/astropy.tex
new file mode 100644
index 0000000..450212d
--- /dev/null
+++ b/reproduce/software/bibtex/astropy.tex
@@ -0,0 +1,97 @@
+%% Copyright (C) 2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{astropy2018,
+ author = {{Astropy Collaboration} and {Price-Whelan}, A.~M. and {Sip{\H o}cz}, B.~M. and
+ {G{\"u}nther}, H.~M. and {Lim}, P.~L. and {Crawford}, S.~M. and
+ {Conseil}, S. and {Shupe}, D.~L. and {Craig}, M.~W. and {Dencheva}, N. and
+ {Ginsburg}, A. and {VanderPlas}, J.~T. and {Bradley}, L.~D. and
+ {P{\'e}rez-Su{\'a}rez}, D. and {de Val-Borro}, M. and {Aldcroft}, T.~L. and
+ {Cruz}, K.~L. and {Robitaille}, T.~P. and {Tollerud}, E.~J. and
+ {Ardelean}, C. and {Babej}, T. and {Bach}, Y.~P. and {Bachetti}, M. and
+ {Bakanov}, A.~V. and {Bamford}, S.~P. and {Barentsen}, G. and
+ {Barmby}, P. and {Baumbach}, A. and {Berry}, K.~L. and {Biscani}, F. and
+ {Boquien}, M. and {Bostroem}, K.~A. and {Bouma}, L.~G. and {Brammer}, G.~B. and
+ {Bray}, E.~M. and {Breytenbach}, H. and {Buddelmeijer}, H. and
+ {Burke}, D.~J. and {Calderone}, G. and {Cano Rodr{\'{\i}}guez}, J.~L. and
+ {Cara}, M. and {Cardoso}, J.~V.~M. and {Cheedella}, S. and {Copin}, Y. and
+ {Corrales}, L. and {Crichton}, D. and {D'Avella}, D. and {Deil}, C. and
+ {Depagne}, {\'E}. and {Dietrich}, J.~P. and {Donath}, A. and
+ {Droettboom}, M. and {Earl}, N. and {Erben}, T. and {Fabbro}, S. and
+ {Ferreira}, L.~A. and {Finethy}, T. and {Fox}, R.~T. and {Garrison}, L.~H. and
+ {Gibbons}, S.~L.~J. and {Goldstein}, D.~A. and {Gommers}, R. and
+ {Greco}, J.~P. and {Greenfield}, P. and {Groener}, A.~M. and
+ {Grollier}, F. and {Hagen}, A. and {Hirst}, P. and {Homeier}, D. and
+ {Horton}, A.~J. and {Hosseinzadeh}, G. and {Hu}, L. and {Hunkeler}, J.~S. and
+ {Ivezi{\'c}}, {\v Z}. and {Jain}, A. and {Jenness}, T. and {Kanarek}, G. and
+ {Kendrew}, S. and {Kern}, N.~S. and {Kerzendorf}, W.~E. and
+ {Khvalko}, A. and {King}, J. and {Kirkby}, D. and {Kulkarni}, A.~M. and
+ {Kumar}, A. and {Lee}, A. and {Lenz}, D. and {Littlefair}, S.~P. and
+ {Ma}, Z. and {Macleod}, D.~M. and {Mastropietro}, M. and {McCully}, C. and
+ {Montagnac}, S. and {Morris}, B.~M. and {Mueller}, M. and {Mumford}, S.~J. and
+ {Muna}, D. and {Murphy}, N.~A. and {Nelson}, S. and {Nguyen}, G.~H. and
+ {Ninan}, J.~P. and {N{\"o}the}, M. and {Ogaz}, S. and {Oh}, S. and
+ {Parejko}, J.~K. and {Parley}, N. and {Pascual}, S. and {Patil}, R. and
+ {Patil}, A.~A. and {Plunkett}, A.~L. and {Prochaska}, J.~X. and
+ {Rastogi}, T. and {Reddy Janga}, V. and {Sabater}, J. and {Sakurikar}, P. and
+ {Seifert}, M. and {Sherbert}, L.~E. and {Sherwood-Taylor}, H. and
+ {Shih}, A.~Y. and {Sick}, J. and {Silbiger}, M.~T. and {Singanamalla}, S. and
+ {Singer}, L.~P. and {Sladen}, P.~H. and {Sooley}, K.~A. and
+ {Sornarajah}, S. and {Streicher}, O. and {Teuben}, P. and {Thomas}, S.~W. and
+ {Tremblay}, G.~R. and {Turner}, J.~E.~H. and {Terr{\'o}n}, V. and
+ {van Kerkwijk}, M.~H. and {de la Vega}, A. and {Watkins}, L.~L. and
+ {Weaver}, B.~A. and {Whitmore}, J.~B. and {Woillez}, J. and
+ {Zabalza}, V. and {Astropy Contributors}},
+ title = "{The Astropy Project: Building an Open-science Project and Status of the v2.0 Core Package}",
+ journal = {AJ},
+archivePrefix = "arXiv",
+ eprint = {1801.02634},
+ primaryClass = "astro-ph.IM",
+ keywords = {methods: data analysis, methods: miscellaneous, methods: statistical, reference systems },
+ year = 2018,
+ month = sep,
+ volume = 156,
+ eid = {123},
+ pages = {123},
+ doi = {10.3847/1538-3881/aabc4f},
+ adsurl = {http://adsabs.harvard.edu/abs/2018AJ....156..123A},
+ adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+}
+
+
+
+
+
+@ARTICLE{astropy2013,
+ author = {{Astropy Collaboration} and {Robitaille}, T.~P. and {Tollerud}, E.~J. and
+ {Greenfield}, P. and {Droettboom}, M. and {Bray}, E. and {Aldcroft}, T. and
+ {Davis}, M. and {Ginsburg}, A. and {Price-Whelan}, A.~M. and
+ {Kerzendorf}, W.~E. and {Conley}, A. and {Crighton}, N. and
+ {Barbary}, K. and {Muna}, D. and {Ferguson}, H. and {Grollier}, F. and
+ {Parikh}, M.~M. and {Nair}, P.~H. and {Unther}, H.~M. and {Deil}, C. and
+ {Woillez}, J. and {Conseil}, S. and {Kramer}, R. and {Turner}, J.~E.~H. and
+ {Singer}, L. and {Fox}, R. and {Weaver}, B.~A. and {Zabalza}, V. and
+ {Edwards}, Z.~I. and {Azalee Bostroem}, K. and {Burke}, D.~J. and
+ {Casey}, A.~R. and {Crawford}, S.~M. and {Dencheva}, N. and
+ {Ely}, J. and {Jenness}, T. and {Labrie}, K. and {Lim}, P.~L. and
+ {Pierfederici}, F. and {Pontzen}, A. and {Ptak}, A. and {Refsdal}, B. and
+ {Servillat}, M. and {Streicher}, O.},
+ title = "{Astropy: A community Python package for astronomy}",
+ journal = {A\&A},
+archivePrefix = "arXiv",
+ eprint = {1307.6212},
+ primaryClass = "astro-ph.IM",
+ keywords = {methods: data analysis, methods: miscellaneous, virtual observatory tools},
+ year = 2013,
+ month = oct,
+ volume = 558,
+ eid = {A33},
+ pages = {A33},
+ doi = {10.1051/0004-6361/201322068},
+ adsurl = {http://adsabs.harvard.edu/abs/2013A\%26A...558A..33A},
+ adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+}
diff --git a/reproduce/software/bibtex/cython.tex b/reproduce/software/bibtex/cython.tex
new file mode 100644
index 0000000..110cb19
--- /dev/null
+++ b/reproduce/software/bibtex/cython.tex
@@ -0,0 +1,21 @@
+%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{cython2011,
+ author = {{Behnel}, S. and {Bradshaw}, R. and {Citro}, C. and {Dalcin}, L. and
+ {Seljebotn}, D.~S. and {Smith}, K.},
+ title = "{Cython: The Best of Both Worlds}",
+ journal = {CiSE},
+ year = 2011,
+ month = mar,
+ volume = 13,
+ number = 2,
+ pages = {31},
+ doi = {10.1109/MCSE.2010.118},
+ adsurl = {http://adsabs.harvard.edu/abs/2011CSE....13b..31B},
+ adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+}
diff --git a/reproduce/software/bibtex/fftw.tex b/reproduce/software/bibtex/fftw.tex
new file mode 100644
index 0000000..60c24a8
--- /dev/null
+++ b/reproduce/software/bibtex/fftw.tex
@@ -0,0 +1,19 @@
+%% Copyright (C) 2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{fftw,
+ author = {M. {Frigo} and S. G. {Johnson}},
+ journal = {IEEE Proc.},
+ title = {The Design and Implementation of FFTW3},
+ year = {2005},
+ volume = {93},
+ number = {2},
+ pages = {216},
+ doi = {10.1109/JPROC.2004.840301},
+ ISSN = {0018-9219},
+ month = {Feb},
+}
diff --git a/reproduce/software/bibtex/gnuastro.tex b/reproduce/software/bibtex/gnuastro.tex
new file mode 100644
index 0000000..91788c9
--- /dev/null
+++ b/reproduce/software/bibtex/gnuastro.tex
@@ -0,0 +1,24 @@
+%% Copyright (C) 2019 Mohammad Akhlaghi <mohammad@akhlaghi.org>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{gnuastro,
+ author = {{Akhlaghi}, M. and {Ichikawa}, T.},
+ title = "{Noise-based Detection and Segmentation of Nebulous Objects}",
+ journal = {ApJS},
+archivePrefix = "arXiv",
+ eprint = {1505.01664},
+ primaryClass = "astro-ph.IM",
+ keywords = {galaxies: irregular, galaxies: photometry, galaxies: structure, methods: data analysis, techniques: image processing, techniques: photometric},
+ year = 2015,
+ month = sep,
+ volume = 220,
+ eid = {1},
+ pages = {1},
+ doi = {10.1088/0067-0049/220/1/1},
+ adsurl = {http://adsabs.harvard.edu/abs/2015ApJS..220....1A},
+ adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+}
diff --git a/reproduce/software/bibtex/matplotlib.tex b/reproduce/software/bibtex/matplotlib.tex
new file mode 100644
index 0000000..8578899
--- /dev/null
+++ b/reproduce/software/bibtex/matplotlib.tex
@@ -0,0 +1,22 @@
+%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@Article{matplotlib2007,
+ Author = {Hunter, J. D.},
+ Title = {Matplotlib: A 2D graphics environment},
+ Journal = {CiSE},
+ Volume = {9},
+ Number = {3},
+ Pages = {90},
+ abstract = {Matplotlib is a 2D graphics package used for Python
+ for application development, interactive scripting, and
+ publication-quality image generation across user
+ interfaces and operating systems.},
+ publisher = {IEEE COMPUTER SOC},
+ doi = {10.1109/MCSE.2007.55},
+ year = 2007
+}
diff --git a/reproduce/software/bibtex/mpi4py.tex b/reproduce/software/bibtex/mpi4py.tex
new file mode 100644
index 0000000..4e0045f
--- /dev/null
+++ b/reproduce/software/bibtex/mpi4py.tex
@@ -0,0 +1,20 @@
+%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{mpi4py2011,
+ author = {{Dalcin}, L.~D. and {Paz}, R.~R. and {Kler}, P.~A. and {Cosimo}, A.
+ },
+ title = "{Parallel distributed computing using Python}",
+ journal = {Advances in Water Resources},
+ year = 2011,
+ month = sep,
+ volume = 34,
+ pages = {1124},
+ doi = {10.1016/j.advwatres.2011.04.013},
+ adsurl = {http://adsabs.harvard.edu/abs/2011AdWR...34.1124D},
+ adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+}
diff --git a/reproduce/software/bibtex/numpy.tex b/reproduce/software/bibtex/numpy.tex
new file mode 100644
index 0000000..0d9028f
--- /dev/null
+++ b/reproduce/software/bibtex/numpy.tex
@@ -0,0 +1,23 @@
+%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{numpy2011,
+ author = {{van der Walt}, S. and {Colbert}, S.~C. and {Varoquaux}, G.},
+ title = "{The NumPy Array: A Structure for Efficient Numerical Computation}",
+ journal = {CiSE},
+archivePrefix = "arXiv",
+ eprint = {1102.1523},
+ primaryClass = "cs.MS",
+ year = 2011,
+ month = mar,
+ volume = 13,
+ number = 2,
+ pages = {22},
+ doi = {10.1109/MCSE.2011.37},
+ adsurl = {http://adsabs.harvard.edu/abs/2011CSE....13b..22V},
+ adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+}
diff --git a/reproduce/software/bibtex/scipy.tex b/reproduce/software/bibtex/scipy.tex
new file mode 100644
index 0000000..60500d2
--- /dev/null
+++ b/reproduce/software/bibtex/scipy.tex
@@ -0,0 +1,34 @@
+%% Copyright (C) 2019 Raul Infante-Sainz <infantesainz@gmail.com>
+%%
+%% Copying and distribution of this file, with or without modification,
+%% are permitted in any medium without royalty provided the copyright
+%% notice and this notice are preserved. This file is offered as-is,
+%% without any warranty.
+
+@ARTICLE{scipy2011,
+ author = {K. J. {Millman} and M. {Aivazis}},
+ journal = {CiSE},
+ title = {Python for Scientists and Engineers},
+ year = {2011},
+ volume = {13},
+ number = {2},
+ pages = {9},
+ keywords = {Special issues and sections;Computer languages;Programming;Scientific computing;Numerical models;Programming languages;Python;Scientific computing;interactive research;Python libraries;Python tools},
+ doi = {10.1109/MCSE.2011.36},
+ ISSN = {1521-9615},
+ month ={March},
+}
+
+@ARTICLE{scipy2007,
+ author = {T. E. {Oliphant}},
+ journal = {CiSE},
+ title = {Python for Scientific Computing},
+ year = {2007},
+ volume = {9},
+ number = {3},
+ pages = {10},
+ keywords = {high level languages;Python;scientific computing;steering language;scientific codes;high-level language;Scientific computing;High level languages;Libraries;Writing;Application software;Embedded software;Software standards;Standards development;Internet;Prototypes;Python;computer languages;scientific programming;scientific computing},
+ doi = {10.1109/MCSE.2007.58},
+ ISSN = {1521-9615},
+ month = {May},
+}