diff options
Diffstat (limited to 'reproduce/config/pipeline')
| -rw-r--r-- | reproduce/config/pipeline/dependency-numpy-scipy.cfg | 39 | ||||
| -rw-r--r-- | reproduce/config/pipeline/dependency-versions.mk | 30 |
2 files changed, 58 insertions, 11 deletions
diff --git a/reproduce/config/pipeline/dependency-numpy-scipy.cfg b/reproduce/config/pipeline/dependency-numpy-scipy.cfg new file mode 100644 index 0000000..0eecf3a --- /dev/null +++ b/reproduce/config/pipeline/dependency-numpy-scipy.cfg @@ -0,0 +1,39 @@ +# THIS IS A COPY OF NUMPY'S site.cfg.example, CUSTOMIZED FOR THIS PIPELINE +# ------------------------------------------------------------------------ + +# This file provides configuration information about non-Python dependencies for +# numpy.distutils-using packages. Create a file like this called "site.cfg" next +# to your package's setup.py file and fill in the appropriate sections. Not all +# packages will use all sections so you should leave out sections that your +# package does not use. + +# IMPORTANT NOTE +# -------------- +# +# The `ALL' grouping does't apply to ATLAS!!!!! + + [ALL] + library_dirs = @LIBDIR@ + include_dirs = @INCDIR@ + + +# FFT libraries +# ------------- +# There are two FFT libraries that we can configure here: FFTW (2 and 3) and djbfft. +# Note that these libraries are not used by numpy or scipy. +# +# http://fftw.org/ +# https://cr.yp.to/djbfft.html +# +# Given only this section, numpy.distutils will try to figure out which version +# of FFTW you are using. + +# Even with this section, Numpy apparently does not use fftw. But we will +# keep it here for the future (if a solution is found). +[fftw] +libraries = fftw3 +# +# For djbfft, numpy.distutils will look for either djbfft.a or libdjbfft.a . +#[djbfft] +#include_dirs = /usr/local/djbfft/include +#library_dirs = /usr/local/djbfft/lib diff --git a/reproduce/config/pipeline/dependency-versions.mk b/reproduce/config/pipeline/dependency-versions.mk index 87b837c..2e74a45 100644 --- a/reproduce/config/pipeline/dependency-versions.mk +++ b/reproduce/config/pipeline/dependency-versions.mk @@ -25,6 +25,7 @@ binutils-version = 2.31.1 cmake-version = 3.12.4 coreutils-version = 8.30 diffutils-version = 3.7 +fftw-version = 3.3.8 findutils-version = 4.6.0.199-e3fc flock-version = 0.2.3 freetype-version = 2.9 @@ -36,6 +37,7 @@ gmp-version = 6.1.2 gnuastro-version = 0.8 grep-version = 3.3 gzip-version = 1.10 +hdf5-version = 1.10.5 isl-version = 0.18 libbsd-version = 0.9.1 libffi-version = 3.2.1 @@ -47,6 +49,7 @@ metastore-version = 1.1.2-23-fa9170b mpfr-version = 4.0.2 mpc-version = 1.1.0 ncurses-version = 6.1 +openmpi-version = 4.0.1 openssl-version = 1.1.1a patchelf-version = 0.9 pkgconfig-version = 0.29.2 @@ -61,13 +64,26 @@ xz-version = 5.2.4 zip-version = 3.0 # Libraries +atlas-version = 3.10.3 cfitsio-version = 3.45 curl-version = 7.63.0 gsl-version = 2.5 libjpeg-version = v9b libtiff-version = 4.0.10 +openblas-version = 0.3.5 zlib-version = 1.2.11 +# Special libraries +# ----------------- +# +# When updating the version of these libraries, please look into the build +# rule first: In one way or another, the version string becomes necessary +# during their build and must be accounted for. +bzip2-version = 1.0.6 +lapack-version = 3.8.0 +libgit2-version = 0.26.0 +wcslib-version = 6.2 + # Python packages # --------------- # @@ -83,13 +99,15 @@ chardet-version = 3.0.4 cryptography-version = 2.6.1 cycler-version = 0.10.0 entrypoints-version = 0.3 +h5py-version = 2.9.0 html5lib-version = 1.0.1 idna-version = 2.8 jeepney-version = 0.4 kiwisolver-version = 1.0.1 keyring-version = 18.0.0 matplotlib-version = 3.0.2 -numpy-version = 1.16.1 +mpi4py-version = 3.0.1 +numpy-version = 1.16.2 pip-version = 19.0.2 pycparser-version = 2.19 pyparsing-version = 2.3.1 @@ -104,13 +122,3 @@ soupsieve-version = 1.8 urllib3-version = 1.24.1 virtualenv-version = 16.4.0 webencodings-version = 0.5.1 - -# Special libraries -# ----------------- -# -# When updating the version of these libraries, please look into the build -# rule first: In one way or another, the version string becomes necessary -# during their build and must be accounted for. -bzip2-version = 1.0.6 -libgit2-version = 0.26.0 -wcslib-version = 6.2 |