diff options
Diffstat (limited to 'reproduce/analysis')
| -rw-r--r-- | reproduce/analysis/config/gnuastro/astbuildprog.conf | 16 | ||||
| -rw-r--r-- | reproduce/analysis/config/gnuastro/astconvertt.conf | 33 | ||||
| -rw-r--r-- | reproduce/analysis/config/gnuastro/aststatistics.conf | 36 | ||||
| -rw-r--r-- | reproduce/analysis/config/gnuastro/gnuastro.conf | 43 | ||||
| -rw-r--r-- | reproduce/analysis/make/initialize.mk | 4 | ||||
| -rw-r--r-- | reproduce/analysis/make/top-make.mk | 2 | ||||
| -rw-r--r-- | reproduce/analysis/make/top-prepare.mk | 2 |
7 files changed, 132 insertions, 4 deletions
diff --git a/reproduce/analysis/config/gnuastro/astbuildprog.conf b/reproduce/analysis/config/gnuastro/astbuildprog.conf new file mode 100644 index 0000000..7adb4d1 --- /dev/null +++ b/reproduce/analysis/config/gnuastro/astbuildprog.conf @@ -0,0 +1,16 @@ +# BuildProgram's configuration file depends on the build and is installed +# along with the rest of Gnuastro. So we'll set any specific configuration +# we want here, then import those. +# +# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org> +# +# Copying and distribution of this file, with or without modification, are +# permitted in any medium without royalty provided the copyright notice and +# this notice are preserved. This file is offered as-is, without any +# warranty. + +# To keep the program's compiled excutable file, comment this line. +deletecompiled 1 + +# Import the built configuration file +config .local/etc/astbuildprog.conf
\ No newline at end of file diff --git a/reproduce/analysis/config/gnuastro/astconvertt.conf b/reproduce/analysis/config/gnuastro/astconvertt.conf new file mode 100644 index 0000000..770ac39 --- /dev/null +++ b/reproduce/analysis/config/gnuastro/astconvertt.conf @@ -0,0 +1,33 @@ +# Default parameters (System) for ConvertType. +# ConvertType is part of GNU Astronomy Utitlies. +# +# Use the long option name of each parameter followed by a value. The name +# and value should be separated by atleast one white-space character (for +# example ` '[space], or tab). Lines starting with `#' are ignored. +# +# For more information, please run these commands: +# +# $ astconvertt --help # Full list of options, short doc. +# $ astconvertt -P # Print all options and used values. +# $ info astconvertt # All options and input/output. +# $ info gnuastro "Configuration files" # How to use configuration files. +# +# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org> +# +# Copying and distribution of this file, with or without modification, are +# permitted in any medium without royalty provided the copyright notice and +# this notice are preserved. This file is offered as-is, without any +# warranty. + +# Input: + +# Output: + quality 100 + widthincm 10.0 + borderwidth 1 + output jpg + +# Flux: + invert 0 + +# Common options diff --git a/reproduce/analysis/config/gnuastro/aststatistics.conf b/reproduce/analysis/config/gnuastro/aststatistics.conf new file mode 100644 index 0000000..90f985d --- /dev/null +++ b/reproduce/analysis/config/gnuastro/aststatistics.conf @@ -0,0 +1,36 @@ +# Default parameters (System) for Statistics. +# Statistics is part of GNU Astronomy Utitlies. +# +# Use the long option name of each parameter followed by a value. The name +# and value should be separated by atleast one white-space character (for +# example ` '[space], or tab). Lines starting with `#' are ignored. +# +# For more information, please run these commands: +# +# $ aststatistics --help # Full list of options, short doc. +# $ aststatistics -P # Print all options and used values. +# $ info aststatistics # All options and input/output. +# $ info gnuastro "Configuration files" # How to use configuration files. +# +# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org> +# +# Copying and distribution of this file, with or without modification, are +# permitted in any medium without royalty provided the copyright notice and +# this notice are preserved. This file is offered as-is, without any +# warranty. + +# Input image: + +# Sky and its STD settings + khdu 1 + meanmedqdiff 0.005 + outliersigma 10 + outliersclip 3,0.2 + smoothwidth 3 + sclipparams 3,0.1 + +# Histogram and CFP settings + numasciibins 70 + asciiheight 10 + numbins 100 + mirrordist 1.5 diff --git a/reproduce/analysis/config/gnuastro/gnuastro.conf b/reproduce/analysis/config/gnuastro/gnuastro.conf new file mode 100644 index 0000000..82cb100 --- /dev/null +++ b/reproduce/analysis/config/gnuastro/gnuastro.conf @@ -0,0 +1,43 @@ +# Default values for the common options to all the programs in GNU +# Astronomy Utitlies. +# +# IMPORTANT NOTE: The `lastconfig' option is very important in a +# reproducible environment. Because we don't want any of Gnuastro's +# programs to go into an un-controlled environment (user or system wide +# configuration files). +# +# The rest of this configuration file is taken from the default Gnuastro +# configuration from its source (`bin/gnuastro.conf'). +# +# Copyright (C) 2018-2020 Mohammad Akhlaghi <mohammad@akhlaghi.org> +# +# Copying and distribution of this file, with or without modification, are +# permitted in any medium without royalty provided the copyright notice and +# this notice are preserved. This file is offered as-is, without any +# warranty. + +# Local project settings (`config' has to be before `lastconfig'). + config .gnuastro/gnuastro-local.conf + lastconfig 1 + +# Input: + hdu 1 + ignorecase 1 + searchin name + stdintimeout 100000 + +# Tessellation + tilesize 30,30 + numchannels 1,1 + remainderfrac 0.1 + workoverch 0 + interpmetric radial + interpnumngb 9 + interponlyblank 0 + +# Output: + tableformat fits-binary + +# Operating mode + quietmmap 0 + minmapsize 2000000000 diff --git a/reproduce/analysis/make/initialize.mk b/reproduce/analysis/make/initialize.mk index 3af0012..d8a8b73 100644 --- a/reproduce/analysis/make/initialize.mk +++ b/reproduce/analysis/make/initialize.mk @@ -308,8 +308,8 @@ $(packagecontents): paper.pdf | $(texdir) # have this machine's local settings and are irrelevant for anyone # else. rm -rf $$dir/tex/build/build* - rm $$dir/reproduce/software/config/installation/LOCAL.conf - rm $$dir/reproduce/software/config/gnuastro/gnuastro-local.conf + rm $$dir/reproduce/software/config/LOCAL.conf + rm $$dir/reproduce/analysis/config/gnuastro/gnuastro-local.conf # When submitting to places like arXiv, they will just run LaTeX # once and won't run `biber'. So we need to also keep the `.bbl' diff --git a/reproduce/analysis/make/top-make.mk b/reproduce/analysis/make/top-make.mk index 6c940b8..43e88b2 100644 --- a/reproduce/analysis/make/top-make.mk +++ b/reproduce/analysis/make/top-make.mk @@ -21,7 +21,7 @@ # Load the local configuration (created after running # `./project configure'). -include reproduce/software/config/installation/LOCAL.conf +include reproduce/software/config/LOCAL.conf diff --git a/reproduce/analysis/make/top-prepare.mk b/reproduce/analysis/make/top-prepare.mk index 1778c6b..be7482c 100644 --- a/reproduce/analysis/make/top-prepare.mk +++ b/reproduce/analysis/make/top-prepare.mk @@ -25,7 +25,7 @@ # Load the local configuration (created after running # `./project configure'). -include reproduce/software/config/installation/LOCAL.conf +include reproduce/software/config/LOCAL.conf |