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authorMohammad Akhlaghi <mohammad@akhlaghi.org>2020-06-18 18:01:33 +0100
committerMohammad Akhlaghi <mohammad@akhlaghi.org>2020-08-08 22:44:23 +0100
commitb3b44798a3f472e5f5a6633de4a582d4c902b008 (patch)
treedee0676bb2696979dc6ed25aa0f78549773468ba /reproduce/software/config/versions.conf
parentd3739931e1662d1476988badb3305e53b0355cda (diff)
IMPORTANT: New software versions (17 basic, 16 high-level and 7 Python)
It was a long time that the Maneage software versions hadn't been updated. With this commit, the versions of all basic software were checked and 17 of that had newer versions were updated. Also, 16 high-level programs and libraries were updated as well as 7 Python modules. The full list is available below. Basic Software (affecting all projects) --------------------------------------- bash 5.0.11 -> 5.0.18 binutils 2.32 -> 2.35 coreutils 8.31 -> 8.32 curl 7.65.3 -> 7.71.1 file 5.36 -> 5.39 gawk 5.0.1 -> 5.1.0 gcc 9.2.0 -> 10.2.0 gettext 0.20.2 -> 0.21 git 2.26.2 -> 2.28.0 gmp 6.1.2 -> 6.2.0 grep 3.3 -> 3.4 libbsd 0.9.1 -> 0.10.0 ncurses 6.1 -> 6.2 perl 5.30.0 -> 5.32.0 sed 4.7 -> 4.8 texinfo 6.6 -> 6.7 xz 5.2.4 -> 5.2.5 Custom programs/libraries ------------------------- astrometrynet 0.77 -> 0.80 automake 0.16.1 -> 0.16.2 bison 3.6 -> 3.7 cfitsio 3.47 -> 3.48 cmake 3.17.0 -> 3.18.1 freetype 2.9 -> 2.10.2 gdb 8.3 -> 9.2 ghostscript 9.50 -> 9.52 gnuastro 0.11 -> 0.12 libgit2 0.28.2 -> 1.0.1 libidn 1.35 -> 1.36 openmpi 4.0.1 -> 4.0.4 R 3.6.2 -> 4.0.2 python 3.7.4 -> 3.8.5 wcslib 6.4 -> 7.3 yaml 0.2.2 -> 0.2.5 Python modules -------------- cython 0.29.6 -> 0.29.21 h5py 2.9.0 -> 2.10.0 matplotlib 3.1.1 -> 3.3.0 mpi4py 3.0.2 -> 3.0.3 numpy 1.17.2 -> 1.19.1 pybind11 2.4.3 -> 2.5.0 scipy 1.3.1 -> 1.5.2
Diffstat (limited to 'reproduce/software/config/versions.conf')
-rw-r--r--reproduce/software/config/versions.conf85
1 files changed, 44 insertions, 41 deletions
diff --git a/reproduce/software/config/versions.conf b/reproduce/software/config/versions.conf
index 7998345..0a9e21e 100644
--- a/reproduce/software/config/versions.conf
+++ b/reproduce/software/config/versions.conf
@@ -16,24 +16,24 @@
# --------------------------------------------------------------
#
# CLASS:BASIC (important identifier, don't modify this line)
-bash-version = 5.0.11
-binutils-version = 2.32
-coreutils-version = 8.31
-curl-version = 7.65.3
+bash-version = 5.0.18
+binutils-version = 2.35
+coreutils-version = 8.32
+curl-version = 7.71.1
dash-version = 0.5.10.2
diffutils-version = 3.7
-file-version = 5.36
+file-version = 5.39
findutils-version = 4.7.0
flock-version = 0.2.3
-gawk-version = 5.0.1
-gcc-version = 9.2.0
-gettext-version = 0.20.2
-git-version = 2.26.2
-gmp-version = 6.1.2
-grep-version = 3.3
+gawk-version = 5.1.0
+gcc-version = 10.2.0
+gettext-version = 0.21
+git-version = 2.28.0
+gmp-version = 6.2.0
+grep-version = 3.4
gzip-version = 1.10
isl-version = 0.18
-libbsd-version = 0.9.1
+libbsd-version = 0.10.0
libiconv-version = 1.16
libtool-version = 2.4.6
libunistring-version = 0.9.10
@@ -44,18 +44,18 @@ make-version = 4.3
metastore-version = 1.1.2-23-fa9170b
mpc-version = 1.1.0
mpfr-version = 4.0.2
-ncurses-version = 6.1
+ncurses-version = 6.2
patchelf-version = 0.10
-perl-version = 5.30.0
+perl-version = 5.32.0
pkgconfig-version = 0.29.2
readline-version = 8.0
-sed-version = 4.7
+sed-version = 4.8
tar-version = 1.32
-texinfo-version = 6.6
+texinfo-version = 6.7
unzip-version = 6.0
wget-version = 1.20.3
which-version = 2.21
-xz-version = 5.2.4
+xz-version = 5.2.5
zip-version = 3.0
zlib-version = 1.2.11
@@ -83,35 +83,34 @@ bzip2-version = 1.0.6
apachelog4cxx-version = 0.10.0-603-014954db
apr-version = 1.7.0
apr-util-version = 1.6.1
-astrometrynet-version = 0.77
+astrometrynet-version = 0.80
atlas-version = 3.10.3
autoconf-version = 2.69.200-babc
-automake-version = 1.16.1
-bison-version = 3.6
+automake-version = 1.16.2
+bison-version = 3.7
boost-version = 1.73.0
cairo-version = 1.16.0
cdsclient-version = 3.84
-cfitsio-version = 3.47
-cmake-version = 3.17.0
+cfitsio-version = 3.48
+cmake-version = 3.18.1
eigen-version = 3.3.7
expat-version = 2.2.9
fftw-version = 3.3.8
flex-version = 2.6.4-91-ga631f5d
-freetype-version = 2.9
-gdb-version = 8.3
-ghostscript-version = 9.50
+freetype-version = 2.10.2
+gdb-version = 9.2
+ghostscript-version = 9.52
ghostscript-fonts-gnu-version = 6.0
ghostscript-fonts-std-version = 8.11
-gnuastro-version = 0.11
+gnuastro-version = 0.12
gperf-version = 3.1
gsl-version = 2.6
-hdf5-version = 1.10.5
healpix-version = 3.50
help2man-version = 1.47.11
imagemagick-version = 7.0.8-67
imfit-version = 1.6.1
libffi-version = 3.2.1
-libidn-version = 1.35
+libidn-version = 1.36
libjpeg-version = v9b
libnsl-version = 1.2.0-4a062cf
libpaper-version = 1.1.28
@@ -120,13 +119,13 @@ libtiff-version = 4.0.10
libtirpc-version = 1.2.6
missfits-version = 2.8.0
openblas-version = 0.3.10
-openmpi-version = 4.0.1
+openmpi-version = 4.0.4
openssh-version = 8.0p1
patch-version = 2.7.6
pcre-version = 8.44
pixman-version = 0.38.0
-python-version = 3.7.4
-R-version = 3.6.2
+python-version = 3.8.5
+R-version = 4.0.2
rpcsvc-proto-version = 1.4
scamp-version = 2.6.7
scons-version = 3.0.5
@@ -136,7 +135,7 @@ swig-version = 3.0.12
tides-version = 2.0
util-linux-version = 2.35
xlsxio-version = 0.2.21
-yaml-version = 0.2.2
+yaml-version = 0.2.5
# Xorg packages
util-macros-version = 1.19.2
@@ -157,8 +156,8 @@ libpthread-stubs-version = 0.4
# Version-dependent build
# -----------------------
lapack-version = 3.8.0
-libgit2-version = 0.28.2
-wcslib-version = 6.4
+libgit2-version = 1.0.1
+wcslib-version = 7.3
# Netpbm's questions in the configure steps maybe change with different or
# new versions.
@@ -177,6 +176,9 @@ openssl-version = 1.1.1a
# any future release.
valgrind-version = 3.15.0
+# Be careful with updateing hdf5 because h5py 2.10.0 doesn't work with
+# version 1.12.0.
+hdf5-version = 1.10.5
@@ -202,7 +204,7 @@ chardet-version = 3.0.4
corner-version = 2.0.1
cryptography-version = 2.6.1
cycler-version = 0.10.0
-cython-version = 0.29.6
+cython-version = 0.29.21
eigency-version = 1.77
emcee-version = 3.0.1
entrypoints-version = 0.3
@@ -210,7 +212,7 @@ esutil-version = 0.6.4
flake8-version = 3.7.8
future-version = 0.18.1
galsim-version = 2.2.1
-h5py-version = 2.9.0
+h5py-version = 2.10.0
html5lib-version = 1.0.1
idna-version = 2.8
jeepney-version = 0.4
@@ -218,22 +220,22 @@ keyring-version = 18.0.0
kiwisolver-version = 1.0.1
lmfit-version = 0.9.14
lsstdesccoord-version = 1.2.0
-matplotlib-version = 3.1.1
-mpi4py-version = 3.0.2
+matplotlib-version = 3.3.0
+mpi4py-version = 3.0.3
mpmath-version = 1.1.0
-numpy-version = 1.17.2
+numpy-version = 1.19.1
pexpect-version = 4.7.0
pip-version = 19.0.2
pycodestyle-version = 2.5.0
pycparser-version = 2.19
pyflakes-version = 2.1.1
-pybind11-version = 2.4.3
+pybind11-version = 2.5.0
pyparsing-version = 2.3.1
pypkgconfig-version = 1.5.1
python-dateutil-version = 2.8.0
pyyaml-version = 5.1
requests-version = 2.21.0
-scipy-version = 1.3.1
+scipy-version = 1.5.2
secretstorage-version = 3.1.1
setuptools-version = 41.6.0
setuptools_scm-version = 3.3.3
@@ -249,3 +251,4 @@ webencodings-version = 0.5.1
#
# Healpy: When any Python module is requested, healpix will also build its
# Python module Healpy.
+healpy-version = xxxxx