From c9383127fae0acb87f900a8832b820cb46bc589b Mon Sep 17 00:00:00 2001 From: Mohammad Akhlaghi Date: Mon, 27 Jan 2020 03:25:16 +0000 Subject: Analysis phase description started with Final paper and verification With this commit, the general outline of the analysis phase is given, as well as a description of the LaTeX macros and their relation to the paper and thier verification. Also, the data-lineage figure was updated to have references.tex also and some resizing of the folders in file-architecture to be more clear. --- tex/src/figure-file-architecture.tex | 44 +++++++++++++++++++----------------- 1 file changed, 23 insertions(+), 21 deletions(-) (limited to 'tex/src/figure-file-architecture.tex') diff --git a/tex/src/figure-file-architecture.tex b/tex/src/figure-file-architecture.tex index c892232..a4d4755 100644 --- a/tex/src/figure-file-architecture.tex +++ b/tex/src/figure-file-architecture.tex @@ -54,7 +54,7 @@ \fi %% reproduce/software/bash - \node [dirbox, at={(-5.75cm,-0.8cm)}, minimum width=2.6cm, minimum height=2.1cm, + \node [dirbox, at={(-5.75cm,-0.8cm)}, minimum width=2.6cm, minimum height=1.6cm, label={[shift={(0,-5mm)}]\texttt{bash/}}, fill=brown!25!white] {}; \ifdefined\fullfilearchitecture \node [node-nonterminal-thin, at={(-5.75cm,-1.5cm)}] {bashrc.sh}; @@ -75,32 +75,34 @@ label={[shift={(0,-5mm)}]\texttt{analysis/}}, fill=brown!20!white] {}; %% reproduce/analysis/config - \node [dirbox, at={(0.15cm,1.5cm)}, minimum width=2.6cm, minimum height=2.1cm, + \node [dirbox, at={(0.15cm,1.5cm)}, minimum width=2.6cm, minimum height=2.6cm, label={[shift={(0,-5mm)}]\texttt{config/}}, fill=brown!25!white] {}; \node [node-nonterminal-thin, at={(0.15cm,0.8cm)}] {INPUTS.conf}; \node [node-nonterminal-thin, at={(0.15cm,0.3cm)}] {param-1.conf}; - \node [node-nonterminal-thin, at={(0.15cm,-0.2cm)}] {param-2.conf}; + \node [node-nonterminal-thin, at={(0.15cm,-0.2cm)}] {param-2a.conf}; + \node [node-nonterminal-thin, at={(0.15cm,-0.7cm)}] {param-2b.conf}; %% reproduce/analysis/make - \node [dirbox, at={(2.95cm,1.5cm)}, minimum width=2.6cm, minimum height=2.1cm, + \node [dirbox, at={(2.95cm,1.5cm)}, minimum width=2.6cm, minimum height=2.6cm, label={[shift={(0,-5mm)}]\texttt{make/}}, fill=brown!25!white] {}; - \node [node-nonterminal-thin, at={(2.95cm,0.8cm)}] {initialize.mk}; - \node [node-nonterminal-thin, at={(2.95cm,0.3cm)}] {download.mk}; - \node [node-nonterminal-thin, at={(2.95cm,-0.2cm)}] {analysis-1.mk}; + \node [node-nonterminal-thin, at={(2.95cm,0.8cm)}] {top-prepare.mk}; + \node [node-nonterminal-thin, at={(2.95cm,0.3cm)}] {top-make.mk}; + \node [node-nonterminal-thin, at={(2.95cm,-0.2cm)}] {initialize.mk}; + \node [node-nonterminal-thin, at={(2.95cm,-0.7cm)}] {analysis1.mk}; %% reproduce/analysis/bash - \node [dirbox, at={(0.15cm,-0.8cm)}, minimum width=2.6cm, minimum height=2.1cm, + \node [dirbox, at={(0.15cm,-1.3cm)}, minimum width=2.6cm, minimum height=1.1cm, label={[shift={(0,-5mm)}]\texttt{bash/}}, fill=brown!25!white] {}; \ifdefined\fullfilearchitecture - \node [node-nonterminal-thin, at={(0.15cm,-1.5cm)}] {process-A.sh}; + \node [node-nonterminal-thin, at={(0.15cm,-2.0cm)}] {process-A.sh}; \fi %% reproduce/analysis/python - \node [dirbox, at={(2.95cm,-0.8cm)}, minimum width=2.6cm, minimum height=2.1cm, + \node [dirbox, at={(2.95cm,-1.3cm)}, minimum width=2.6cm, minimum height=1.6cm, label={[shift={(0,-5mm)}]\texttt{python/}}, fill=brown!25!white] {}; \ifdefined\fullfilearchitecture - \node [node-nonterminal-thin, at={(2.95cm,-1.5cm)}] {operation-B.py}; - \node [node-nonterminal-thin, at={(2.95cm,-2.0cm)}] {fitting-plot.py}; + \node [node-nonterminal-thin, at={(2.95cm,-2.0cm)}] {operation-B.py}; + \node [node-nonterminal-thin, at={(2.95cm,-2.5cm)}] {fitting-plot.py}; \fi %% tex/ @@ -108,28 +110,28 @@ label={[shift={(0,-5mm)}]\texttt{tex/}}, fill=brown!15!white] {}; %% tex/src - \node [dirbox, at={(6cm,2.1cm)}, minimum width=2.5cm, minimum height=2.1cm, + \node [dirbox, at={(6cm,2.1cm)}, minimum width=2.5cm, minimum height=1.6cm, label={[shift={(0,-5mm)}]\texttt{src/}}, fill=brown!20!white] {}; + \node [node-nonterminal-thin, at={(6cm,1.4cm)}] {references.tex}; \ifdefined\fullfilearchitecture - \node [node-nonterminal-thin, at={(6cm,1.4cm)}] {preamble-1.tex}; \node [node-nonterminal-thin, at={(6cm,0.9cm)}] {figure-1.tex}; \fi %% tex/build \ifdefined\fullfilearchitecture - \node [dirbox, at={(6cm,-0.2cm)}, minimum width=2.5cm, minimum height=1.3cm, + \node [dirbox, at={(6cm,0.1cm)}, minimum width=2.5cm, minimum height=1.3cm, label={[shift={(0,-5mm)}]\texttt{build/}}, dashed, , fill=brown!20!white] {}; - \node [anchor=west, at={(4.7cm,-1.0cm)}] {\scriptsize\sf Symbolic link to}; - \node [anchor=west, at={(4.7cm,-1.3cm)}] {\scriptsize\sf \LaTeX{} build directory.}; + \node [anchor=west, at={(4.7cm,-0.7cm)}] {\scriptsize\sf Symbolic link to}; + \node [anchor=west, at={(4.7cm,-1.0cm)}] {\scriptsize\sf \LaTeX{} build directory.}; \fi %% tex/tikz \ifdefined\fullfilearchitecture - \node [dirbox, at={(6cm,-1.7cm)}, minimum width=2.5cm, minimum height=1.6cm, + \node [dirbox, at={(6cm,-1.6cm)}, minimum width=2.5cm, minimum height=1.6cm, label={[shift={(0,-5mm)}]\texttt{tikz/}}, dashed, fill=brown!20!white] {}; - \node [anchor=west, at={(4.67cm,-2.5cm)}] {\scriptsize\sf Symbolic link to TikZ}; - \node [anchor=west, at={(4.67cm,-2.8cm)}] {\scriptsize\sf directory (figures built}; - \node [anchor=west, at={(4.67cm,-3.1cm)}] {\scriptsize\sf by \LaTeX).}; + \node [anchor=west, at={(4.67cm,-2.4cm)}] {\scriptsize\sf Symbolic link to TikZ}; + \node [anchor=west, at={(4.67cm,-2.7cm)}] {\scriptsize\sf directory (figures built}; + \node [anchor=west, at={(4.67cm,-3.0cm)}] {\scriptsize\sf by \LaTeX).}; \fi %% .local -- cgit v1.2.1