From 48e61df320e7571e527049cd3eef5cf96b8cb491 Mon Sep 17 00:00:00 2001
From: Mohammad Akhlaghi <mohammad@akhlaghi.org>
Date: Mon, 23 Mar 2020 03:16:06 +0000
Subject: Analysis and configuration file sections complete

With this commit a description of these two important parts have been added
to the project, along with several figures showing various parts of the
files that are discussed. I also done some other restructuring of the
figures and files to make things fit better into the the description of the
paper.
---
 tex/src/figure-data-lineage.tex | 46 ++++++++++++++++++++---------------------
 1 file changed, 23 insertions(+), 23 deletions(-)

(limited to 'tex/src/figure-data-lineage.tex')

diff --git a/tex/src/figure-data-lineage.tex b/tex/src/figure-data-lineage.tex
index 010a0be..7379b2f 100644
--- a/tex/src/figure-data-lineage.tex
+++ b/tex/src/figure-data-lineage.tex
@@ -58,11 +58,11 @@
   \node (downloadmk)   [node-makefile, at={(-2.93cm,-1.3cm)},
     label={[shift={(0,-5mm)}]\texttt{download.mk}}] {};
   \node (analysis1mk)  [node-makefile, at={(-0.13cm,-1.3cm)},
-    label={[shift={(0,-5mm)}]\texttt{analysis1.mk}}] {};
+    label={[shift={(0,-5mm)}]\texttt{format.mk}}] {};
   \node (analysis2mk)  [node-makefile, at={(2.67cm,-1.3cm)},
-    label={[shift={(0,-5mm)}]\texttt{analysis2.mk}}] {};
-  \node (analysis2mk)  [node-makefile, at={(5.47cm,-1.3cm)},
-    label={[shift={(0,-5mm)}]\texttt{analysis3.mk}}] {};
+    label={[shift={(0,-5mm)}]\texttt{demo-plot.mk}}] {};
+  \node (analysis3mk)  [node-makefile, at={(5.47cm,-1.3cm)},
+    label={[shift={(0,-5mm)}]\texttt{another-step.mk}}] {};
 
   %% verify.mk
   \node [at={(-5.3cm,-2.8cm)},
@@ -149,7 +149,7 @@
 
   %% analysis1.tex
   \ifdefined\analysisonetex
-  \node (a1tex) [node-terminal, at={(-0.13cm,-0.8cm)}] {analysis1.tex};
+  \node (a1tex) [node-terminal, at={(-0.13cm,-0.8cm)}] {format.tex};
   \draw [rounded corners, -] (a1tex) |- (initialize-south);
   \fi
 
@@ -167,14 +167,17 @@
 
   %% analysis2.tex
   \ifdefined\analysistwotex
-  \node (a2tex) [node-terminal, at={(2.67cm,-0.8cm)}] {analysis2.tex};
+  \node (a2tex) [node-terminal, at={(2.67cm,-0.8cm)}] {demo-plot.tex};
   \draw [rounded corners, -] (a2tex) |- (initialize-south);
   \fi
 
   %% out-2b.dat
   \ifdefined\outtwob
-  \node (out2b) [node-terminal, at={(2.67cm,0.3cm)}] {out-2b.dat};
+  \node (menkedemoyear) [node-nonterminal, at={(2.67cm,4.6cm)}] {menke-demo-year.conf};
+  \node (a2tex-west) [node-point, at={(1.27cm,-0.8cm)}] {};
+  \node (out2b) [node-terminal, at={(2.67cm,0.3cm)}] {tools-per-year.txt};
   \draw [->] (out2b) -- (a2tex);
+  \draw [->,rounded corners] (menkedemoyear.west) -| (a2tex-west) |- (a2tex);
   \fi
 
   %% out-2b dependencies
@@ -184,39 +187,36 @@
 
   %% analysis3.tex
   \ifdefined\analysisthreetex
-  \node (a3tex) [node-terminal, at={(5.47cm,-0.8cm)}] {analysis3.tex};
-  \draw [rounded corners, -] (a3tex) |- (initialize-south);
+  \node [opacity=0.6] (a3tex) [node-terminal, at={(5.47cm,-0.8cm)}] {another-step.tex};
+  \draw [opacity=0.6, rounded corners, -, dashed] (a3tex) |- (initialize-south);
   \fi
 
   %% Outputs of analysis3
   \ifdefined\analysisthreeouts
-  \node (out3a) [node-terminal, at={(5.47cm,2.7cm)}] {out-3a.dat};
-  \node (out3b) [node-terminal, at={(5.47cm,1.1cm)}] {out-3b.dat};
+  \node [opacity=0.6] (out3a) [node-terminal, at={(5.47cm,2.7cm)}] {out-3a.dat};
+  \node [opacity=0.6] (out3b) [node-terminal, at={(5.47cm,1.1cm)}] {out-3b.dat};
   \node (a3tex-east) [node-point, at={(6.87cm,-0.8cm)}] {};
-  \draw [->,rounded corners] (out3a.east) -| (a3tex-east) |- (a3tex);
-  \draw [->] (out3b) -- (a3tex);
+  \draw [opacity=0.6, ->,rounded corners, dashed] (out3a.east) -| (a3tex-east) |- (a3tex);
+  \draw [opacity=0.6, ->, dashed] (out3b) -- (a3tex);
   \fi
 
   %% out-2a.dat
   \ifdefined\outtwoa
-  \node (out2a) [node-terminal, at={(2.67cm,1.9cm)}] {out-2a.dat};
-  \draw [->, rounded corners] (out2a.south) |- (out3b);
+  \node [opacity=0.6] (out2a) [node-terminal, at={(2.67cm,1.9cm)}] {demo-out.dat};
+  \draw [opacity=0.6, ->, rounded corners, dashed] (out2a.south) |- (out3b);
   \fi
 
   %% Dependencies of out-2a
   \ifdefined\outtwoadep
-  \node (a2conf1) [node-nonterminal, at={(2.67cm,5.3cm)}]  {param-2a.conf};
-  \node (a2conf2) [node-nonterminal, at={(2.67cm,4.6cm)}]  {param-2b.conf};
   \node (out2a-west) [node-point, at={(1.27cm,1.9cm)}] {};
-  \draw [->,rounded corners] (a2conf1.west) -| (out2a-west) |- (out2a);
-  \draw [->,rounded corners] (a2conf2.west) -| (out2a-west) |- (out2a);
-  %\draw [->] (input1) -- (out2a);
+  \draw [opacity=0.6, ->, dashed] (input2) -- (out2a);
   \fi
 
   %% Dependencies of out-3a
   \ifdefined\outthreeadep
-  \node (out3a-west) [node-point, at={(4.07cm,2.7cm)}] {};
-  \node (a3conf1) [node-nonterminal, at={(5.47cm,4.6cm)}]  {param-3.conf};
-  \draw [rounded corners] (a3conf1.west) -| (out3a-west) |- (out3a);
+  \node [opacity=0.6] (out3a-west) [node-point, at={(4.07cm,2.7cm)}] {};
+  \draw [opacity=0.6, ->,rounded corners, dashed] (input2) |- (out3a);
+  \node [opacity=0.6] (a3conf1) [node-nonterminal, at={(5.47cm,4.6cm)}]  {param-3.conf};
+  \draw [opacity=0.6, rounded corners, dashed] (a3conf1.west) -| (out3a-west) |- (out3a);
   \fi
 \end{tikzpicture}
-- 
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