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2021-04-17Finally published journal DOI addedMohammad Akhlaghi-1/+1
In the project's 'metadata.conf', we also have an option to store the journal DOI of the project (that will later be printed in the output file products). So now that the paper's DOI has been set by the journal, it was time to add it in the project too. While looking at the usage of the metadata, I noticed that the "Publication checklist" of 'README-hacking.md' didn't talk about it. In fact, the part about putting metadata went into a lot of detail without even mentioning the generic 'print-general-metadata' variable (previously called 'print-copyright') that is created in 'initialize.mk'. So I removed those extra points and just recommended using this variable for plain-text files and putting similar info in other formats. Some other minor changes were made: - The metadata now doesn't need the fixed 'https://doi.org/' prefix (to make it consistent with the arXiv identifier). Inside 'initialize.mk', there are now two variables called 'doi-prefix-url' and 'arxiv-prefix-url' that contain the fixed prefix. - The 'print-copyright' name was clearly outdated for all the extra metadata that this variable created (including the copyright). So its name was changed to 'print-general-metadata'. The generic Maneage changes will be taken into Maneage after this (they were tested here).
2021-01-03Updated copyrights of project-specific copyrightsMohammad Akhlaghi-1/+1
Having entered 2021, it was necessary to update the years of all the copyright statements.
2020-06-09Two minor corrections to avoid warnings in make and make cleanMohammad Akhlaghi-10/+2
There were two small warnings that are removed with this commit: - In the end, when we print the number of words in the PDF, we hadn't accounted for the fact that 'paper.pdf' doesn't always exist (for example when './project make clean' is run). So a check was added to only print the number of words when a PDF exists. - I noticed that the '$(texdir)/to-publish' directory was being built both in 'initialize.mk' and in 'demo-plot.mk'. So the one in 'demo-plot.mk' has been removed.
2020-06-09Imported Maneage, minor conflicts fixed, a bug found and fixedMohammad Akhlaghi-1/+1
Some minor conflicts came up in 'initialize.mk' and 'verify.mk'. For the former, I chose the version on Maneage, for the latter, I kept the 'master' version on the checksums of this project, but kept the Maneage version for the rest of the improvements there (like printing the verified files as LaTeX comments in 'verify.tex'. While testing the conflicts, I noticed a bug (in the LaTeX macro for the number of years in the Menke+20 paper) in the previous build, thanks to the verification step :-)! Fortunately it wasn't actually printed in the PDF, so a normal reader won't recognize. The bug was caused by the recently added meta-data/commented lines in the 'tools-per-year.txt' file: when calculating the number of years studied in that paper, we were simply counting all the lines and we had forgot to correct this after adding comments. As a result, the un-used LaTeX macro file was saying that they have studied 47 years instead of the real 31 years! This element was actually used in the very first (+40 page!) draft of the paper that was summarized to fit into the journal limits.
2020-06-04Verification activated, README added, Proper metadata in plot dataMohammad Akhlaghi-5/+30
All the steps following the to-be-added (in 'README-hacking.md') publication checklist prior to the final check from new clone have been added: - 'README.md' file has been set. - "Reproducible supplement" was added just above the keywords, pointing to Zenodo. - A link to the to-be-uploaded data underlying the plot was added in the caption of the tools-per-year plot. - A new meta-data configuration file was added to store basic project metadata to be used throughout the project. This will later be taken into Maneage. For examle the project title is now stored here and written into the paper's LaTeX source and output datasets automatically. - Verification was activated and plot's data and LaTeX macro files are now automatically verified. - A complete metadata was added for the data underlying the plot. - A generic function was added in 'initialize.mk' that will automatically write project info and copyright in all plain-text outputs.
2020-05-22Re-write of the paper to fit in ~6000 words and IEEE formatMohammad Akhlaghi-2/+2
Following the fact that the DSJ editor decided that this paper doesn't fit into their scope, we decided to submit it to IEEE's Computing in Science and Engineering (CiSE). So with this commit the text was re-written to fit into their style and word-count limitations.
2020-04-13Full existing contents summaried, only discussion to goMohammad Akhlaghi-0/+4
The contents until two commits ago when I started to summarize the paper are now in a new and shorter format: previously the discussion started on page 25, but now it starts on page 17. It is still a little longer than 8000 words, but not as significantly as before. I will add the discussion and also try to summarize it futher before submission.
2020-03-23Analysis and configuration file sections completeMohammad Akhlaghi-0/+59
With this commit a description of these two important parts have been added to the project, along with several figures showing various parts of the files that are discussed. I also done some other restructuring of the figures and files to make things fit better into the the description of the paper.