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The README file didn't match the current way to set the top-level
directories (through `./configure'), it was still the old-fashioned way of
manually finding and opening the file. The explanation is now corrected.
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The basic title, short description and author section of the checklist was
moved immediately after copyright because it is more related to it. The
description of Gnuastro is now before `README' because the user will
confront Gnuastro in `README' and this will provide a good introduction on
what to do with it.
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The creation of a new Git repo is now moved to the end of the checklist. It
was not in place as the third step before. Now, the user makes all the
standard changes and just before they start going into the details of their
research, they define their new repository.
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The description of adding a title and authors was made slightly more clear.
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The first commit didn't have an explanation on correcting the title of the
project in the final PDF or the top-level Makefile, so a pointer was added
to the list. Also, some extra dependencies were removed from `README' and
its paragraphs were scaled to the new width of 75 characters that is
defined in `.dir-locals.el' (for Emacs settings, taken from Gnuastro).
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Let's start working on this pipeline independently with this first
commit. It is based on my previous experiences, but I had never made a
skeleton of a pipeline before, it was always within a working analysis.
But now that the pipeline has a separate repository for its self, we will
be able to work on it and use it as a base for future work and modify it to
make it even better. Hopefully in time (and with the help of others), it
will grow and become much more robust and useful.
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