diff options
Diffstat (limited to 'reproduce/software')
| -rw-r--r-- | reproduce/software/config/TARGETS.conf | 2 | ||||
| -rw-r--r-- | reproduce/software/config/texlive-packages.conf | 5 | ||||
| -rw-r--r-- | reproduce/software/make/high-level.mk | 1 | ||||
| -rwxr-xr-x | reproduce/software/shell/configure.sh | 15 |
4 files changed, 13 insertions, 10 deletions
diff --git a/reproduce/software/config/TARGETS.conf b/reproduce/software/config/TARGETS.conf index 8d3bdb0..00ce387 100644 --- a/reproduce/software/config/TARGETS.conf +++ b/reproduce/software/config/TARGETS.conf @@ -36,7 +36,7 @@ # Programs and libraries. -top-level-programs = gnuastro +top-level-programs = xlsxio # Python libraries/modules. top-level-python = diff --git a/reproduce/software/config/texlive-packages.conf b/reproduce/software/config/texlive-packages.conf index c53e170..6760eba 100644 --- a/reproduce/software/config/texlive-packages.conf +++ b/reproduce/software/config/texlive-packages.conf @@ -21,4 +21,7 @@ texlive-packages = tex fancyhdr ec newtx fontaxes xkeyval etoolbox xcolor \ preprint ulem biblatex biber logreq pgf pgfplots fp \ courier tex-gyre txfonts times csquotes kastrup \ trimspaces pdftexcmds pdfescape letltxmacro bitset \ - mweights + mweights \ + \ + alegreya enumitem fontspec lastpage listings environ \ + tcolorbox diff --git a/reproduce/software/make/high-level.mk b/reproduce/software/make/high-level.mk index eccc073..ffab19c 100644 --- a/reproduce/software/make/high-level.mk +++ b/reproduce/software/make/high-level.mk @@ -1220,6 +1220,7 @@ $(ibidir)/xlsxio: $(ibidir)/cmake \ + # Since we want to avoid complicating the PATH, we are putting a symbolic # link of all the TeX Live executables in $(ibdir). But symbolic links are # hard to track for Make (as a target). Also, TeX in general is optional diff --git a/reproduce/software/shell/configure.sh b/reproduce/software/shell/configure.sh index cce6e62..71b07cc 100755 --- a/reproduce/software/shell/configure.sh +++ b/reproduce/software/shell/configure.sh @@ -808,10 +808,10 @@ if [ x"$input_dir" = x ]; then else indir=$input_dir fi -wfpc2name=$(awk '!/^#/ && $1=="WFPC2IMAGE" {print $3}' $adir/INPUTS.conf) -wfpc2md5=$(awk '!/^#/ && $1=="WFPC2MD5" {print $3}' $adir/INPUTS.conf) -wfpc2size=$(awk '!/^#/ && $1=="WFPC2SIZE" {print $3}' $adir/INPUTS.conf) -wfpc2url=$(awk '!/^#/ && $1=="WFPC2URL" {print $3}' $adir/INPUTS.conf) +mk20name=$(awk '!/^#/ && $1=="MK20DATA" {print $3}' $adir/INPUTS.conf) +mk20md5=$(awk '!/^#/ && $1=="MK20MD5" {print $3}' $adir/INPUTS.conf) +mk20size=$(awk '!/^#/ && $1=="MK20SIZE" {print $3}' $adir/INPUTS.conf) +mk20url=$(awk '!/^#/ && $1=="MK20URL" {print $3}' $adir/INPUTS.conf) if [ $rewritepconfig = yes ] && [ x"$input_dir" = x ]; then cat <<EOF @@ -824,10 +824,9 @@ please specify the directory hosting them on this system. If you don't, they will be downloaded automatically. Each file is shown with its total volume and its 128-bit MD5 checksum in parenthesis. - $wfpc2name ($wfpc2size, $wfpc2md5): - A 100x100 Hubble Space Telescope WFPC II image used in the FITS - standard webpage as a demonstration of this file format. - URL: $wfpc2url/$wfpc2name + $mk20name ($mk20size, $mk20md5): + Supplementary dataset to http://dx.doi.org/10.1101/2020.01.15.908111 + URL: $mk20url NOTE I: This directory, or the datasets above, are optional. If it doesn't exist, the files will be downloaded in the build directory and used. |